Pre_GI: BLASTP Hits

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Query: NC_009654:2958316:2982440 Marinomonas sp. MWYL1, complete genome

Start: 2982440, End: 2982997, Length: 558

Host Lineage: Marinomonas; Marinomonas; Oceanospirillaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: Marinomonas MWYL1 was isolated from the root surface of the salt marsh grass Spartina anglica, growing near the North Norfolk, England village of Stiffkey. The genus Marinomonas comprises a widespread group of g -proteobacteria that exist in coastal waters, and which had been earlier been included in the genus Alteromonas. The interest in Marinomonas MWYL 1 was that it could grow on the betaine molecule Dimethylsulphoniopropionate (DMSP) as sole carbon source and, when it did do, it released large amounts of the gas dimethyl sulphide. DMSP is a compatible solute that is used by many marine phytoplankton and seaweed macroalgae as an osmoticum and an anti-stress compound. In addition, a few known land angiosperms make DMSP and these include certain species of Spartina - hence the choice of these plants as a source for DMSP-degrading bacteria. Indeed, others had shown previously that the DMSP-catabolising bacteria isolated from Spartina root surfaces included Marinomonas strains.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015276:2804874:282282828228282823376549Marinomonas mediterranea MMB-1 chromosome, complete genomeOligoribonuclease6e-89326
NC_018868:3229381:323390032339003234448549Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomeoligoribonuclease7e-70263
NC_016513:1185241:119921911992191199767549Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeoligoribonuclease1e-63241
NC_013416:875758:889738889738890286549Aggregatibacter actinomycetemcomitans D11S-1, complete genomeoligoribonuclease1e-63241
NC_012691:2614603:271925527192552719800546Tolumonas auensis DSM 9187, complete genomeExonuclease RNase T and DNA polymerase III4e-63240
NC_016002:2453919:245391924539192454464546Pseudogulbenkiania sp. NH8B, complete genomeoligoribonuclease2e-60231
NC_009465:90000:125572125572126117546Candidatus Vesicomyosocius okutanii HA, complete genomeoligoribonuclease4e-59227
NC_016632:120500:131043131043131588546Serratia symbiotica str. 'Cinara cedri' chromosome, completeoligoribonuclease4e-59226
NC_020541:2264521:228866122886612289227567Rhodanobacter sp. 2APBS1, complete genome5' exoribonuclease)' target='_blank' title='Search database for similar gene annotations'>oligoribonuclease (3'->5' exoribonuclease)1e-55215
NC_005061:65861:819328193282474543Candidatus Blochmannia floridanus, complete genomeoligoribonuclease7e-50196
NC_015696:47484:595195951960055537Francisella sp. TX077308 chromosome, complete genome3'-to-5' oligoribonuclease3e-44177
NC_007164:622000:625885625885626517633Corynebacterium jeikeium K411, complete genomeputative oligoribonuclease4e-43174
NC_012704:1641684:166341416634141664082669Corynebacterium kroppenstedtii DSM 44385, complete genomeputative oligoribonuclease5e-43173
NC_013235:1938889:195770319577031958341639Nakamurella multipartita DSM 44233, complete genomeExonuclease RNase T and DNA polymerase III2e-41168
NC_019673:1275627:130059013005901301186597Saccharothrix espanaensis DSM 44229 complete genomeOligoribonuclease8e-39159
NC_008278:1876435:189109018910901891860771Frankia alni ACN14a, complete genomeOligoribonuclease9e-39159
NC_013093:1157476:117432711743271174953627Actinosynnema mirum DSM 43827, complete genomeExonuclease RNase T and DNA polymerase III8e-38156
NC_008578:1827605:185484318548431855652810Acidothermus cellulolyticus 11B, complete genomeExonuclease, RNase T and DNA polymerase III2e-37154
NC_009077:3851203:385376838537683854415648Mycobacterium sp. JLS, complete genomeExonuclease, RNase T and DNA polymerase III5e-37153
NC_014318:7821227:782707578270757827650576Amycolatopsis mediterranei U32 chromosome, complete genomeoligoribonuclease2e-34145
NC_017186:7822448:782712178271217827696576Amycolatopsis mediterranei S699 chromosome, complete genomeoligoribonuclease2e-34145
NC_014643:1986440:199410819941081994701594Rothia dentocariosa ATCC 17931 chromosome, complete genomeoligoribonuclease1e-32139
NC_017221:441948:445676445676446326651Bifidobacterium longum subsp. longum KACC 91563 chromosome,oligoribonuclease4e-32137
NC_010816:2252732:225578922557892256439651Bifidobacterium longum DJO10A, complete genomeOligoribonuclease6e-32136
NC_020126:2405175:241216224121622412683522Myxococcus stipitatus DSM 14675, complete genomeoligoribonuclease2e-1892