Pre_GI: BLASTP Hits

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Query: NC_009649:94871:109220 Klebsiella pneumoniae subsp. pneumoniae MGH 78578 plasmid pKPN3,

Start: 109220, End: 109960, Length: 741

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a patient in 1994. Opportunistic pathogen that causes multiple hospital-acquired infections. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007941:11319:444734447345213741Escherichia coli UTI89 plasmid pUTI89, complete sequencesite-specific recombinase4e-134476
NC_016860:4024000:403354640335464034286741Salmonella enterica subsp. enterica serovar Typhimurium strintegrase2e-132471
NC_010488:48868:703407034071080741Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequencesite-specific recombinase6e-132469
NC_015963:117178:140533140533141273741Enterobacter asburiae LF7a plasmid pENTAS01, complete sequenceintegrase family protein3e-128457
NC_014305:66500:685506855069341792Erwinia billingiae Eb661 plasmid pEB170, complete sequenceSite-specific recombinase9e-111399
NC_014842:19411:416954169542561867Pantoea sp. At-9b plasmid pPAT9B05, complete sequenceintegrase family protein3e-55214
NC_009837:92000:9951599515100318804Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequenceresolvase9e-51200
NC_007941:11319:510975109751906810Escherichia coli UTI89 plasmid pUTI89, complete sequenceresolvase7e-49193
NC_006625:111000:112051112051112830780Klebsiella pneumoniae NTUH-K2044 plasmid pK2044, complete sequencephage integrase family protein2e-48192
NC_013285:1:123912392093855Cronobacter turicensis plasmid pCTU3, complete sequenceResolvase5e-48191
NC_009790:42112:567925679257505714Escherichia coli E24377A plasmid pETEC_74, complete sequenceresolvase9e-47186
NC_015566:345084:351720351720352316597Serratia sp. AS12 chromosome, complete genomeintegrase family protein1e-28126
NC_015567:346500:351885351885352481597Serratia sp. AS9 chromosome, complete genomeintegrase family protein1e-28126
NC_018868:619113:657835657835658572738Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomephage integrase family protein5e-24111
NC_008740:1414926:141818414181841418924741Marinobacter aquaeolei VT8, complete genomephage integrase family protein7e-21100
NC_017506:1785872:178923917892391789835597Marinobacter adhaerens HP15 chromosome, complete genomeresolvase1e-2099.8
NC_009464:180335:196349196349197185837Uncultured methanogenic archaeon RC-I, complete genomeintegrase2e-1169.7
NC_015167:1666000:168520416852041686097894Cellulophaga lytica DSM 7489 chromosome, complete genomeintegrase family protein1e-0963.5
NC_014098:1670327:168634716863471687228882Bacillus tusciae DSM 2912 chromosome, complete genomeintegrase family protein2e-0963.2
NC_019815:761480:775648775648776571924Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiintegrase/recombinase XerD3e-0962.4
NC_003228:2010643:203162020316202032504885Bacteroides fragilis NCTC 9343, complete genomeputative tyrosine recombinase9e-0960.8
NC_011297:1296968:129945012994501300340891Dictyoglomus thermophilum H-6-12, complete genometyrosine recombinase XerD8e-0960.8
NC_014933:220146:2444792444792456091131Bacteroides helcogenes P 36-108 chromosome, complete genomeintegrase family protein8e-0960.8
NC_015703:5865921:5868888586888858705041617Runella slithyformis DSM 19594 chromosome, complete genomeintegron integrase6e-0858.2
NC_017025:311832:3299693299693310061038Flavobacterium indicum GPTSA100-9, complete genomeIntegrase/recombinase9e-0857.4
NC_015186:2197236:225468822546882255593906Acidiphilium multivorum AIU301, complete genomeputative transposase for insertion sequence element1e-0757
NC_016641:5671186:5692012569201256931511140Paenibacillus terrae HPL-003 chromosome, complete genomeintegrase/recombinase y4qK1e-0757
NC_013958:29548:328063280633738933Nitrosococcus halophilus Nc4 plasmid pNHAL01, complete sequenceintegrase family protein1e-0757
NC_007712:1262593:127829912782991279018720Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-0756.6
NC_015164:493159:5145225145225156281107Bacteroides salanitronis DSM 18170 chromosome, complete genomeintegrase family protein2e-0756.6
NC_013521:2193203:221540622154062216359954Sanguibacter keddieii DSM 10542, complete genometyrosine recombinase XerD2e-0756.6
NC_019960:1658657:168363516836351684561927Prevotella dentalis DSM 3688 chromosome 1, complete sequencesite-specific recombinase XerD2e-0756.2
NC_018645:2390032:240389624038962404771876Desulfobacula toluolica Tol2, complete genomeintegrase2e-0756.2
NC_018645:2390032:239111423911142391989876Desulfobacula toluolica Tol2, complete genomeintegrase2e-0756.2
NC_020299:127480:145428145428146327900Candidatus Kinetoplastibacterium oncopeltii TCC290E, completeintegrase/recombinase XerD2e-0756.2
NC_007645:1785000:179918717991871800041855Hahella chejuensis KCTC 2396, complete genometyrosine recombinase XerD4e-0755.5
NC_015164:3727500:3739561373956137406671107Bacteroides salanitronis DSM 18170 chromosome, complete genomeintegrase family protein4e-0755.1
NC_009454:1246393:124639312463931247280888Pelotomaculum thermopropionicum SI, complete genomesite-specific recombinase XerD8e-0754.3
NC_018645:3029785:304322430432243044132909Desulfobacula toluolica Tol2, complete genometyrosine recombinase subunit D XerD8e-0754.3
NC_012214:1267589:1267589126758912686591071Erwinia pyrifoliae Ep1/96, complete genomeintegrase7e-0754.3
NC_016901:2594942:262298326229832623873891Shewanella baltica OS678 chromosome, complete genomeintegrase family protein1e-0653.9
NC_009997:2635025:266306626630662663956891Shewanella baltica OS195, complete genomeintegrase family protein1e-0653.9
NC_012969:2476318:251726225172622518158897Methylovorus glucosetrophus SIP3-4 chromosome, complete genometyrosine recombinase XerD1e-0653.9
NC_011586:268927:3115973115973126311035Acinetobacter baumannii AB0057 chromosome, complete genomeIntI1 integrase1e-0653.5
NC_014329:1041556:104443210444321045364933Corynebacterium pseudotuberculosis FRC41 chromosome, completetyrosine recombinase1e-0653.5
NC_016781:1039716:104442310444231045355933Corynebacterium pseudotuberculosis 3/99-5 chromosome, completetyrosine recombinase XerD1e-0653.5
NC_017031:1039548:104425510442551045187933Corynebacterium pseudotuberculosis P54B96 chromosome, completetyrosine recombinase XerD1e-0653.5
NC_017301:1037519:104406810440681045000933Corynebacterium pseudotuberculosis C231 chromosome, completetyrosine recombinase XerD1e-0653.5
NC_017303:1039562:104426910442691045201933Corynebacterium pseudotuberculosis I19 chromosome, complete genometyrosine recombinase XerD1e-0653.5
NC_017305:1037133:104184010418401042772933Corynebacterium pseudotuberculosis PAT10 chromosome, completetyrosine recombinase XerD1e-0653.5
NC_018645:247917:252284252284252859576Desulfobacula toluolica Tol2, complete genometyrosine recombinase (Fragment)2e-0652.8
NC_014228:2883500:2887800288780028888011002Xenorhabdus nematophila ATCC 19061, complete genomeInt (fragment)2e-0652.8
NC_007498:1611986:1615835161583516168361002Pelobacter carbinolicus DSM 2380, complete genomesite-specific recombinase XerD3e-0652.4
NC_015435:537483:554461554461555315855Metallosphaera cuprina Ar-4 chromosome, complete genomephage integrase family protein3e-0652
NC_014924:2108116:2131128213112821321351008Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeintegron integrase4e-0652
NC_012779:3176820:322735132273513228250900Edwardsiella ictaluri 93-146, complete genometyrosine recombinase XerD, putative6e-0651.2
NC_016629:3308329:333954633395463340514969Desulfovibrio africanus str. Walvis Bay chromosome, completeTyrosine recombinase xerC7e-0651.2
NC_007626:959684:994461994461995318858Magnetospirillum magneticum AMB-1, complete genomeIntegrase9e-0650.8