Pre_GI: BLASTP Hits

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Query: NC_009512:27783:27783 Pseudomonas putida F1, complete genome

Start: 27783, End: 28130, Length: 348

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015733:5909821:595050259505025950855354Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-33140
NC_002947:6123608:614341061434106143751342Pseudomonas putida KT2440, complete genomehypothetical protein2e-29127
NC_010170:4800000:483812448381244838384261Bordetella petrii, complete genomeprobable Cation efflux system protein cusF precursor3e-1167
NC_013446:2820000:2856887285688728584071521Comamonas testosteroni CNB-2, complete genomeefflux transporter, RND family, MFP subunit2e-1064.3
NC_010473:623810:648946648946649278333Escherichia coli str. K-12 substr. DH10B, complete genomeperiplasmic copper-binding protein5e-0960.1
NC_014836:33278:395953959539957363Desulfurispirillum indicum S5 chromosome, complete genomeputative cation efflux system transmembrane protein2e-0857.8
NC_016616:2768053:2788227278822727898161590Dechlorosoma suillum PS chromosome, complete genomeRND family efflux transporter, MFP subunit4e-0856.6
NC_013446:2820000:285335828533582853696339Comamonas testosteroni CNB-2, complete genomeheavy metal efflux pump, CzcA family3e-0753.9
NC_010170:4800000:4833327483332748348321506Bordetella petrii, complete genomePutative membrane fusion protein silB precursor3e-0753.9
NC_008782:1308007:131112313111231311314192Acidovorax sp. JS42, complete genome3e-0753.9
NC_009832:3703202:3723823372382337252741452Serratia proteamaculans 568, complete genomeefflux transporter, RND family, MFP subunit4e-0753.5
NC_008782:2857899:288220728822072882437231Acidovorax sp. JS42, complete genome5e-0753.1
NC_009659:1923925:1944494194449419459871494Janthinobacterium sp. Marseille chromosome, complete genomecation efflux system transmembrane protein9e-0752.4
NC_009138:1544835:1547984154798415494771494Herminiimonas arsenicoxydans, complete genomeputative exported protein involved in metalloid efflux2e-0651.6
NC_011386:3723019:3739452373945237431923741Oligotropha carboxidovorans OM5, complete genomecation efflux system protein CusA2e-0650.8
NC_015422:2806832:283361828336182833965348Alicycliphilus denitrificans K601 chromosome, complete genomeCopper binding periplasmic protein CusF2e-0650.8
NC_009659:1050532:1052898105289810543911494Janthinobacterium sp. Marseille chromosome, complete genomecation efflux system transmembrane protein3e-0650.8
NC_016616:1091606:1106100110610011076861587Dechlorosoma suillum PS chromosome, complete genomeRND family efflux transporter, MFP subunit4e-0650.1