Pre_GI: BLASTP Hits

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Query: NC_009512:1025365:1037255 Pseudomonas putida F1, complete genome

Start: 1037255, End: 1038496, Length: 1242

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from a polluted creek in Urbana, Illinois, USA by enrichment culture with ethylbenzyne as a sole source of carbon and energy. Its ability to degrade several different compounds including benzene, toluene, and ethylbenzene makes this species useful in the bioremediation of sites contaminated with multiple aromatic hydrocarbons. Underground gasoline tanks which have developed leaks can contaminate soil and water with a variety of these compounds. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015566:4547702:4560108456010845613521245Serratia sp. AS12 chromosome, complete genomesodium/hydrogen exchanger4e-43176
NC_009615:2039964:2042081204208120443692289Parabacteroides distasonis ATCC 8503 chromosome, complete genomecation/H+ antiporter4e-35149
NC_014248:2654471:2657399265739926596422244Nostoc azollae 0708 chromosome, complete genomesodium/hydrogen exchanger5e-29129
NC_009921:2605721:2626404262640426277861383Frankia sp. EAN1pec, complete genomesodium/hydrogen exchanger2e-24113
NC_009142:5484883:5508422550842255096691248Saccharopolyspora erythraea NRRL 2338, complete genomesodium/hydrogen antiporter2e-23110
NC_014817:1063173:1080268108026810816291362Asticcacaulis excentricus CB 48 chromosome 2, complete sequencesodium/hydrogen exchanger2e-23110
NC_011884:3393500:3410562341056234128142253Cyanothece sp. PCC 7425, complete genomesodium/hydrogen exchanger2e-22107
NC_019964:861000:8754668754668777392274Halovivax ruber XH-70, complete genomeKef-type K+ transport system, membrane component1e-21104
NC_014541:3927500:3945581394558139468461266Ferrimonas balearica DSM 9799 chromosome, complete genometransporter, CPA2 family5e-1375.9
NC_019962:2129393:2150515215051521517531239Natrinema pellirubrum DSM 15624, complete genomeKef-type K+ transport system, membrane component1e-1274.7
NC_007955:1779222:1779222177922217803941173Methanococcoides burtonii DSM 6242, complete genomesodium/hydrogen exchanger3e-1273.6
NC_007777:1170406:1184253118425311856111359Frankia sp. CcI3, complete genomesodium/hydrogen exchanger7e-1272
NC_012804:271459:2865452865452876871143Thermococcus gammatolerans EJ3, complete genomeNa+/H+ antiporter, napA type (napA)9e-1065.1
NC_020207:1795993:1817963181796318191141152Enterococcus faecium NRRL B-2354, complete genomeNa, H antiporter1e-0964.7
NC_008525:270310:2897552897552909151161Pediococcus pentosaceus ATCC 25745, complete genomeKef-type K+ transport system, membrane component1e-0964.3
NC_003909:927955:9340869340869352131128Bacillus cereus ATCC 10987, complete genomegermination protein gerN8e-0962
NC_008497:447427:4647184647184658991182Lactobacillus brevis ATCC 367, complete genomeKef-type K+ transport system, membrane component2e-0860.5
NC_015152:2887414:2902747290274729043871641Spirochaeta sp. Buddy chromosome, complete genomesodium/hydrogen exchanger3e-0860.1
NC_010612:5236229:5245082524508252464611380Mycobacterium marinum M, complete genomehypothetical protein7e-0858.9
NC_019897:3669888:3694375369437536955501176Thermobacillus composti KWC4 chromosome, complete genomeKef-type K+ transport system membrane protein3e-0756.6
NC_015499:352934:3743163743163754791164Thermodesulfobium narugense DSM 14796 chromosome, complete genomesodium/hydrogen exchanger5e-0755.8
NC_015759:1117122:112538511253851126347963Weissella koreensis KACC 15510 chromosome, complete genomeKef-type K+ transport system, membrane component1e-0551.6