Pre_GI: BLASTP Hits

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Query: NC_009480:99640:99640 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 99640, End: 102741, Length: 3102

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003910:3448983:3457409345740934603602952Colwellia psychrerythraea 34H, complete genomeserine protease, subtilase family2e-65251
NC_009092:1047500:1069130106913010727293600Shewanella loihica PV-4, complete genomepeptidase S8 and S53, subtilisin, kexin, sedolisin2e-40168
NC_009092:3732390:3749031374903137539684938Shewanella loihica PV-4, complete genomepeptidase S8 and S53, subtilisin, kexin, sedolisin1e-30135
NC_004347:3437369:3448058344805834519213864Shewanella oneidensis MR-1, complete genomeserine protease, subtilase family3e-30134
NC_008700:672326:6845146845146887134200Shewanella amazonensis SB2B, complete genomepeptidase S8 and S53, subtilisin, kexin, sedolisin3e-29131
NC_017208:4845281:4848329484832948523934065Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeminor extracellular protease VpR4e-1171.2
NC_014171:4708282:4711329471132947155524224Bacillus thuringiensis BMB171 chromosome, complete genomeminor extracellular protease VpR6e-1170.5
NC_018704:2149229:2149229214922921513852157Amphibacillus xylanus NBRC 15112, complete genomeputative S8 family peptidase5e-0860.8
NC_012804:348235:3482353482353502442010Thermococcus gammatolerans EJ3, complete genomeSubtilisin-like serine protease (subtilase)2e-0655.8
NC_014830:3387479:3391937339193733941772241Intrasporangium calvum DSM 43043 chromosome, complete genomepeptidase S8 and S53 subtilisin kexin sedolisin2e-0655.5
NC_014829:4392799:4394244439424443965232280Bacillus cellulosilyticus DSM 2522 chromosome, complete genomepeptidase S8 and S53 subtilisin kexin sedolisin3e-0655.1
NC_003413:1521080:1553191155319115551551965Pyrococcus furiosus DSM 3638, complete genomealkaline serine protease4e-0654.7
NC_013595:4796436:4818661481866148224223762Streptosporangium roseum DSM 43021, complete genomepeptidase S8/S53 subtilisin kexin sedolisin6e-0653.9