Pre_GI: BLASTP Hits

Some Help

Query: NC_009480:739395:740920 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 740920, End: 741579, Length: 660

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017317:2181284:218062021806202181291672Corynebacterium ulcerans 809 chromosome, complete genomehypothetical protein9e-65246
NC_015683:2279904:227990422799042280575672Corynebacterium ulcerans BR-AD22 chromosome, complete genomehypothetical protein1e-64246
NC_014329:2036812:203804720380472038718672Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein1e-64245
NC_016781:2035543:203798020379802038651672Corynebacterium pseudotuberculosis 3/99-5 chromosome, completetRNA/rRNA methyltransferase1e-64245
NC_017031:2036500:203781620378162038487672Corynebacterium pseudotuberculosis P54B96 chromosome, completetRNA/rRNA methyltransferase1e-64245
NC_017300:2034000:203535120353512036022672Corynebacterium pseudotuberculosis 1002 chromosome, completetRNA/rRNA methyltransferase1e-64245
NC_017301:2025978:202841520284152029086672Corynebacterium pseudotuberculosis C231 chromosome, completetRNA/rRNA methyltransferase1e-64245
NC_017303:2036500:203785220378522038523672Corynebacterium pseudotuberculosis I19 chromosome, complete genometRNA/rRNA methyltransferase1e-64245
NC_017305:2034207:203544220354422036113672Corynebacterium pseudotuberculosis PAT10 chromosome, completetRNA/rRNA methyltransferase1e-64245
NC_016932:2007001:200943620094362010107672Corynebacterium pseudotuberculosis 316 chromosome, complete genometRNA/rRNA methyltransferase1e-64245
NC_016782:2088858:210208121020812102749669Corynebacterium diphtheriae 241 chromosome, complete genome23S rRNA guanosine-2'-O-methyltransferase rlmB8e-64243
NC_016800:2127200:214066621406662141334669Corynebacterium diphtheriae BH8 chromosome, complete genome23S rRNA guanosine-2'-O-methyltransferase rlmB7e-63240
NC_012590:2501593:251766025176602518403744Corynebacterium aurimucosum ATCC 700975, complete genomeputative rRNA methylase5e-63240
NC_016114:3711000:372984437298443730554711Streptomyces flavogriseus ATCC 33331 chromosome, complete genometRNA/rRNA methyltransferase SpoU1e-62239
NC_012704:376783:379340379340380059720Corynebacterium kroppenstedtii DSM 44385, complete genomeputative rRNA methylase4e-62237
NC_006958:2911711:293013329301332930801669Corynebacterium glutamicum ATCC 13032, complete genomeSPOU RRNA METHYLASE FAMILY PROTEIN4e-60231
NC_003450:2938404:295682829568282957448621Corynebacterium glutamicum ATCC 13032, complete genomerRNA methylase3e-60231
NC_014246:611275:635199635199635795597Mobiluncus curtisii ATCC 43063 chromosome, complete genometRNA/rRNA methyltransferase3e-44178
NC_007912:4396972:441142444114244411909486Saccharophagus degradans 2-40, complete genometRNA/rRNA methyltransferase (SpoU) family protein1e-1169.7
NC_013361:4959323:497837249783724979061690Escherichia coli O26:H11 str. 11368 chromosome, complete genometRNA guanosine-2'-O-methyltransferase6e-0961.2
NC_010468:49074:665696656967258690Escherichia coli ATCC 8739, complete genometRNA guanosine-2'-O-methyltransferase6e-0961.2
NC_004337:3590323:379483137948313795520690Shigella flexneri 2a str. 301, complete genomeputative RNA methylase6e-0961.2
NC_016845:5162481:518391351839135184602690Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,tRNA guanosine-2'-O-methyltransferase1e-0860.1
NC_012731:5074000:509543850954385096127690Klebsiella pneumoniae NTUH-K2044 chromosome, complete genometRNA guanosine-2'-O-methyltransferase2e-0859.3
NC_020064:4751097:477385547738554774517663Serratia marcescens FGI94, complete genomerRNA methylase4e-0858.2
NC_015968:74124:977249772498413690Enterobacter asburiae LF7a chromosome, complete genometRNA/rRNA methyltransferase SpoU6e-0857.8
NC_013716:4306695:439516943951694395858690Citrobacter rodentium ICC168, complete genometRNA (guanosine-2'-O)-methyltransferase8e-0857.4
NC_011094:3778000:382134838213483822037690Salmonella enterica subsp. enterica serovar Schwarzengrund strtRNA guanosine-2'-O-methyltransferase1e-0756.6
NC_013956:4326388:434694743469474347648702Pantoea ananatis LMG 20103 chromosome, complete genomeTrmH1e-0756.6
NC_020260:4029951:404472940447294045418690Cronobacter sakazakii Sp291, complete genometRNA guanosine-2'-O-methyltransferase3e-0755.5
NC_009778:4014026:402879140287914029480690Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein3e-0755.5
NC_013282:4312791:431491643149164315605690Cronobacter turicensis, complete genometRNA guanosine-2'-O-methyltransferase1e-0653.5
NC_009664:570768:589915589915590733819Kineococcus radiotolerans SRS30216, complete genometRNA/rRNA methyltransferase (SpoU)5e-0651.2