Pre_GI: BLASTP Hits

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Query: NC_009480:31412:51503 Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete

Start: 51503, End: 52507, Length: 1005

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009480:31412:6788567885688861002Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeconserved hypothetical protein, putative extracellular protease2e-144511
NC_014550:2091797:2095704209570420967111008Arthrobacter arilaitensis Re117, complete genomehypothetical protein1e-22107
NC_009480:31412:5388353883548961014Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeconserved hypothetical protein, putative extracellular serine protease9e-1477.8
NC_013510:1295439:1306554130655413076511098Thermomonospora curvata DSM 43183, complete genomehypothetical protein5e-1065.9
NC_013510:675368:694003694003694926924Thermomonospora curvata DSM 43183, complete genomehypothetical protein2e-0963.5
NC_006087:765081:7752527752527762771026Leifsonia xyli subsp. xyli str. CTCB07, complete genomesecreted protein4e-0962.4
NC_009480:31412:503765037651356981Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative extracellular serine protease5e-0962
NC_013595:9149273:9151051915105191521661116Streptosporangium roseum DSM 43021, complete genomehypothetical protein3e-0756.2
NC_009480:99640:113031113031114005975Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative extracellular serine protease3e-0756.2
NC_009480:99640:103428103428104384957Clavibacter michiganensis subsp. michiganensis NCPPB 382, completehypothetical protein5e-0755.5
NC_013595:9149273:9155146915514691563241179Streptosporangium roseum DSM 43021, complete genomehypothetical protein6e-0755.5
NC_013595:9149273:9156471915647191575351065Streptosporangium roseum DSM 43021, complete genomehypothetical protein2e-0653.1