Pre_GI: BLASTP Hits

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Query: NC_009479:34001:47770 Clavibacter michiganensis subsp. michiganensis NCPPB 382 plasmid

Start: 47770, End: 48534, Length: 765

Host Lineage: Clavibacter michiganensis; Clavibacter; Microbacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Phytopathogen that causes bacterial wilt and canker of tomato (Lycopersicon esculentum). This is considered to be the most important bacterial disease of tomato causing substantial economic losses worldwide. Bacteria enter the plant by wounds on root or stem and then find their way into the xylem allowing a massive systemic colonization. The first stage of the disease is characterized by unilateral wilting of leaves. Wilting then spreads to all leaves, canker lesions develop on the stem and the plant dies. If infection occurs at a late stage of plant development, plants can survive and yield fruit that may have spots, so called bird's eyes. Often the seeds will be infected and this has been the major source for outbreaks of Clavibacter michiganensis subsp. michiganensis infections in agriculture. Members of the Clavibacter genus are known to produce antimicrobial compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010399:13222:2789527895289051011Clavibacter michiganensis subsp. sepedonicus plasmid pCS1, completehypothetical protein9e-66249
NC_009480:31412:570435704357396354Clavibacter michiganensis subsp. michiganensis NCPPB 382, completehypothetical protein5e-42171
NC_010407:410918:426839426839427600762Clavibacter michiganensis subsp. sepedonicus chromosome, completehypothetical protein3e-0652
NC_009480:31412:453274532745899573Clavibacter michiganensis subsp. michiganensis NCPPB 382, completehypothetical protein4e-0652