Pre_GI: BLASTP Hits

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Query: NC_009457:351512:381188 Vibrio cholerae O395 chromosome 2, complete sequence

Start: 381188, End: 381862, Length: 675

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:2744393:277268127726812773355675Vibrio cholerae MJ-1236 chromosome 1, complete sequencetoxin co-regulated pilin A1e-83309
NC_015761:299386:330060330060330806747Salmonella bongori NCTC 12419, complete genometype IV major pilin3e-26118
NC_014618:1040381:105183210518321052554723Enterobacter cloacae SCF1 chromosome, complete genomeToxin-coregulated pilus subunit TcpA5e-23107
NC_013716:4885776:490041549004154901131717Citrobacter rodentium ICC168, complete genomeputative Type IV pilin5e-1374.7
NC_020063:528296:534555534555535268714Enterobacteriaceae bacterium strain FGI 57, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein5e-1271.2
NC_017047:4379989:438513443851344385832699Rahnella aquatilis HX2 chromosome, complete genomeToxin-coregulated pilus subunit TcpA2e-1065.9
NC_015061:4286000:429124842912484291946699Rahnella sp. Y9602 chromosome, complete genomeToxin-coregulated pilus subunit TcpA2e-1065.9