Pre_GI: BLASTP Hits

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Query: NC_009457:351512:380231 Vibrio cholerae O395 chromosome 2, complete sequence

Start: 380231, End: 380641, Length: 411

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012582:882931:911650911650912060411Vibrio cholerae O395 chromosome chromosome I, complete sequencetoxin co-regulated pilus biosynthesis protein H1e-66251
NC_016944:859492:886517886517886927411Vibrio cholerae IEC224 chromosome I, complete sequencetoxin co-regulated pilus biosynthesis protein H8e-65244
NC_016445:338288:366996366996367406411Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completetoxin co-regulated pilus biosynthesis protein H8e-65244
NC_012668:2744393:277389827738982774308411Vibrio cholerae MJ-1236 chromosome 1, complete sequencetoxin co-regulated pilus biosynthesis protein H transcriptional activator of ToxT promoter8e-65244
NC_012578:818241:846948846948847358411Vibrio cholerae M66-2 chromosome I, complete sequencetoxin co-regulated pilus biosynthesis protein H8e-65244
NC_002505:860789:889496889496889906411Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completetoxin co-regulated pilus biosynthesis protein H8e-65244