Pre_GI: BLASTP Hits

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Query: NC_009456:998935:1018206 Vibrio cholerae O395 chromosome 1, complete sequence

Start: 1018206, End: 1018865, Length: 660

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Aquatic organism that causes Cholera. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012583:242760:242104242104242763660Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein8e-129459
NC_013892:992811:100976010097601010416657Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein3e-40164
NC_004578:4499143:452141545214154521939525Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein4e-32137
NC_009654:615504:634867634867635589723Marinomonas sp. MWYL1, complete genomehypothetical protein3e-31134
NC_008751:1736512:175261517526151753226612Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomehypothetical protein1e-25116
NC_016602:2586044:260350726035072604109603Vibrio furnissii NCTC 11218 chromosome 1, complete sequencebacteriophage protein1e-23109
NC_008750:3314309:331430933143093314944636Shewanella sp. W3-18-1, complete genomehypothetical protein1e-21102