Pre_GI: BLASTP Hits

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Query: NC_009455:53000:81298 Dehalococcoides sp. BAV1 chromosome, complete genome

Start: 81298, End: 81921, Length: 624

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009455:53000:939229392294554633Dehalococcoides sp. BAV1 chromosome, complete genomeXRE family transcriptional regulator2e-46185
NC_009718:1411793:143010814301081430635528Fervidobacterium nodosum Rt17-B1, complete genomecupin 2 domain-containing protein3e-1065.1
NC_013282:1804909:181500918150091815710702Cronobacter turicensis, complete genome26 kDa repressor protein5e-0961.2
NC_009714:224325:226887226887227588702Campylobacter hominis ATCC BAA-381, complete genomehypothetical protein1e-0859.7
NC_009659:997779:100550010055001006123624Janthinobacterium sp. Marseille chromosome, complete genomeCro/CI family transcriptional regulator2e-0859.3
NC_017060:59500:102616102616103311696Rahnella aquatilis HX2 plasmid PRA1, complete sequencephage repressor protein2e-0859.3
NC_013716:2764550:276546227654622766157696Citrobacter rodentium ICC168, complete genomeputative phage repressor protein2e-0859.3
NC_020134:1328302:133941313394131339952540Clostridium stercorarium subsp. stercorarium DSM 8532, completeputative DNA-binding protein7e-0857.4
NC_008825:2525380:254043925404392540762324Methylibium petroleiphilum PM1, complete genomehelix-turn-helix protein7e-0857.4
NC_002936:253760:263667263667264320654Dehalococcoides ethenogenes 195, complete genometranscriptional repressor LexA, putative1e-0756.6
NC_002936:797110:810595810595811248654Dehalococcoides ethenogenes 195, complete genometranscriptional repressor LexA, putative1e-0756.6
NC_010995:1417329:141941314194131419736324Cellvibrio japonicus Ueda107, complete genomeHelix-turn-helix motif1e-0756.2
NC_013850:1887556:189996518999651900627663Klebsiella variicola At-22 chromosome, complete genometranscriptional regulator, XRE family3e-0755.1
NC_009706:1972000:199046619904661990768303Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein1e-0653.1
NC_015727:764744:769843769843770589747Cupriavidus necator N-1 plasmid BB1p, complete sequenceCro/CI family transcriptional regulator protein1e-0653.1
NC_011979:646518:664994664994665314321Geobacter sp. FRC-32, complete genometranscriptional regulator, XRE family1e-0652.8
NC_007297:1001981:101870510187051019529825Streptococcus pyogenes MGAS5005, complete genomephage transcriptional repressor2e-0652.8
NC_013941:3182576:319016231901623190836675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein2e-0652.4
NC_011768:1718869:177180317718031772150348Desulfatibacillum alkenivorans AK-01, complete genometranscriptional regulator, XRE family3e-0652
NC_011768:3385719:341239234123923412739348Desulfatibacillum alkenivorans AK-01, complete genometranscriptional regulator, XRE family4e-0651.6
NC_012108:946314:962372962372962944573Desulfobacterium autotrophicum HRM2, complete genometranscriptional regulator (Cro/CI family protein)5e-0651.2
NC_014910:465980:495325495325495654330Alicycliphilus denitrificans BC chromosome, complete genomehelix-turn-helix domain protein7e-0650.8
NC_016630:1385719:139310813931081393626519Filifactor alocis ATCC 35896 chromosome, complete genomeCro/CI family transcriptional regulator9e-0650.4
NC_011979:773673:785967785967786287321Geobacter sp. FRC-32, complete genometranscriptional regulator, XRE family9e-0650.1