Pre_GI: BLASTP Hits

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Query: NC_009439:918534:937054 Pseudomonas mendocina ymp, complete genome

Start: 937054, End: 937305, Length: 252

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015851:89006:920809208092286207Acidithiobacillus caldus SM-1 megaplasmid, complete sequenceHeavy metal transport/detoxification protein4e-0856.6
NC_016593:981500:997369997369997572204Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeCopper chaperone copZ4e-0753.5
NC_008782:1510000:152431815243181524611294Acidovorax sp. JS42, complete genomeHeavy metal transport/detoxification protein7e-0752.8
NC_009439:2427120:245848124584812458681201Pseudomonas mendocina ymp, complete genomeheavy metal transport/detoxification protein8e-0752.4
NC_015422:2858228:288263628826362882929294Alicycliphilus denitrificans K601 chromosome, complete genomeHeavy metal transport/detoxification protein1e-0652.4
NC_009434:3611738:366166736616673661939273Pseudomonas stutzeri A1501, complete genomecopper-binding protein, putative1e-0652
NC_012803:1980955:198611319861131986442330Micrococcus luteus NCTC 2665, complete genomecopper chaperone1e-0652
NC_016147:586433:602834602834603037204Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeheavy metal transport/detoxification protein2e-0651.6
NC_013169:474856:489574489574489903330Kytococcus sedentarius DSM 20547, complete genomecopper chaperone1e-0651.6
NC_013947:6221877:624238362423836242592210Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeHeavy metal transport/detoxification protein3e-0650.4
NC_014633:655693:673246673246673515270Ilyobacter polytropus DSM 2926 plasmid pILYOP01, complete sequenceheavy metal transport/detoxification protein4e-0650.1
NC_009512:27783:313843138431584201Pseudomonas putida F1, complete genomeHeavy metal transport/detoxification protein4e-0650.1
NC_009253:2315958:233815323381532338353201Desulfotomaculum reducens MI-1 chromosome, complete genomeheavy metal transport/detoxification protein8e-0649.3
NC_009620:1531000:154802915480291548250222Sinorhizobium medicae WSM419 plasmid pSMED01, complete sequenceheavy metal transport/detoxification protein1e-0548.9