Pre_GI: BLASTP Hits

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Query: NC_009439:608500:616413 Pseudomonas mendocina ymp, complete genome

Start: 616413, End: 617495, Length: 1083

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012779:3316877:3331783333178333328501068Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-131468
NC_013508:3188978:3235053323505332361201068Edwardsiella tarda EIB202, complete genomehypothetical protein5e-131467
NC_011283:5011497:5017762501776250188291068Klebsiella pneumoniae 342 chromosome, complete genomeAppr-1-p processing protein1e-130466
NC_012917:985617:1004086100408610051531068Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeAppr-1-p processing domain protein7e-130463
NC_006512:1722138:1733297173329717343641068Idiomarina loihiensis L2TR, complete genomehypothetical protein2e-115416
NC_017080:3317701:3328136332813633292001065Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein5e-109394
NC_015761:299386:3252833252833263351053Salmonella bongori NCTC 12419, complete genomeprophage protein2e-65249
NC_012912:1053618:1085194108519410862431050Dickeya zeae Ech1591, complete genomeAppr-1-p processing domain protein4e-64245
NC_006510:3133965:3139399313939931404331035Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-63243
NC_015573:1573621:1583131158313115841711041Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeAppr-1-p processing domain-containing protein2e-62239
NC_008752:166877:1780231780231790841062Acidovorax avenae subsp. citrulli AAC00-1, complete genomeAppr-1-p processing domain protein4e-60232
NC_007404:1570000:157702515770251578020996Thiobacillus denitrificans ATCC 25259, complete genomeAppr-1-p processing protein2e-58226
NC_005125:3570385:3581452358145235824891038Gloeobacter violaceus PCC 7421, complete genomehypothetical protein4e-55215
NC_010125:955863:9894679894679905221056Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein8e-43174
NC_012225:1497934:1520514152051415215631050Brachyspira hyodysenteriae WA1, complete genomeAppr-1-p processing enzyme family protein4e-41169
NC_014391:16188:2758527585287391155Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeAppr-1-p processing domain-containing protein1e-32140
NC_020541:468584:4754464754464765581113Rhodanobacter sp. 2APBS1, complete genomeputative phosphatase, C-terminal domain of histone macro H2A1 like protein5e-28125
NC_018721:2872780:288404028840402884723684Psychroflexus torquis ATCC 700755 chromosome, complete genomeprotein with ADP-ribose binding module, MACRO superfamily3e-2099.8
NC_020126:9938287:994611499461149946584471Myxococcus stipitatus DSM 14675, complete genomehypothetical protein2e-1067
NC_011295:1218792:122922412292241229742519Coprothermobacter proteolyticus DSM 5265, complete genomeAppr-1-p processing enzyme family protein1e-0654.7
NC_009337:715500:757642757642758079438Chlorobium phaeovibrioides DSM 265 chromosome, complete genomehypothetical protein4e-0652.8