Pre_GI: BLASTP Hits

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Query: NC_009439:608500:615763 Pseudomonas mendocina ymp, complete genome

Start: 615763, End: 616416, Length: 654

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:985617:100515010051501005806657Pectobacterium carotovorum subsp. carotovorum PC1, complete genomehypothetical protein5e-60230
NC_012779:3316877:333284733328473333503657Edwardsiella ictaluri 93-146, complete genomehypothetical protein5e-59227
NC_013508:3188978:323440032344003235056657Edwardsiella tarda EIB202, complete genomehypothetical protein7e-59226
NC_011283:5011497:501882650188265019482657Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-58225
NC_006512:1722138:173143117314311731958528Idiomarina loihiensis L2TR, complete genomehypothetical protein5e-44177
NC_017080:3317701:332749833274983328139642Phycisphaera mikurensis NBRC 102666, complete genomehypothetical protein4e-43174
NC_007404:1570000:157806815780681578748681Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein2e-1065.9
NC_015573:1573621:158418615841861584833648Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomehypothetical protein5e-0961.2
NC_008752:166877:177370177370178008639Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein9e-0857
NC_005125:3570385:358084835808483581432585Gloeobacter violaceus PCC 7421, complete genomehypothetical protein5e-0754.7