Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:574437:583191 Pseudomonas mendocina ymp, complete genome

Start: 583191, End: 583718, Length: 528

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:617020:625639625639626073435Pseudomonas mendocina NK-01 chromosome, complete genomepilus assembly protein, PilQ3e-65247
NC_015740:636667:646447646447646974528Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype 4 fimbrial biogenesis protein PilP3e-63240
NC_009434:608765:619651619651620178528Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein PilP9e-63239
NC_007645:6096345:610661161066116107153543Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein PilP4e-38157
NC_007912:3403101:341337734133773413871495Saccharophagus degradans 2-40, complete genometype 4 fimbrial biogenesis protein PilP3e-32137
NC_007484:266594:275447275447276025579Nitrosococcus oceani ATCC 19707, complete genomePilus assembly protein, PilQ4e-29127
NC_014315:352395:363795363795364373579Nitrosococcus watsoni C-113 chromosome, complete genomePilus assembly protein PilP4e-28124
NC_015572:293665:310041310041310595555Methylomonas methanica MC09 chromosome, complete genomePilus assembly protein PilP1e-27122
NC_013722:2784000:280748328074832808022540Xanthomonas albilineans, complete genomeprobable type iv pilus assembly protein pilp3e-25114
NC_015731:2950874:295298129529812953499519Nitrosomonas sp. Is79A3 chromosome, complete genomePilus assembly protein PilP8e-24109
NC_016616:1233555:124267912426791243209531Dechlorosoma suillum PS chromosome, complete genomeTfp pilus assembly protein PilP4e-1994
NC_008344:1899317:191574819157481916275528Nitrosomonas eutropha C91, complete genomePilus assembly protein, PilQ9e-1786.3
NC_008825:3298506:331067433106743311219546Methylibium petroleiphilum PM1, complete genomefimbrial assembly protein1e-1686.3
NC_007298:219783:229068229068229613546Dechloromonas aromatica RCB, complete genomePilus assembly protein, PilQ3e-1581.3
NC_008786:18688:297552975530297543Verminephrobacter eiseniae EF01-2, complete genomePilus assembly protein, PilQ6e-1580.5
NC_015563:1172745:118104611810461181594549Delftia sp. Cs1-4 chromosome, complete genomePilus assembly protein PilP8e-1579.7
NC_008781:708811:717671717671718222552Polaromonas naphthalenivorans CJ2, complete genomePilus assembly protein, PilQ2e-1478.6
NC_010002:6189733:620270862027086203256549Delftia acidovorans SPH-1, complete genomePilus assembly protein PilP3e-1478.2
NC_008782:752686:771565771565772116552Acidovorax sp. JS42, complete genomePilus assembly protein, PilQ2e-1375.5
NC_011992:717107:730225730225730776552Acidovorax ebreus TPSY, complete genomePilus assembly protein PilP2e-1375.5