Pre_GI: BLASTP Hits

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Query: NC_009439:574437:582574 Pseudomonas mendocina ymp, complete genome

Start: 582574, End: 583194, Length: 621

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015410:617020:624926624926625552627Pseudomonas mendocina NK-01 chromosome, complete genometype 4 fimbrial biogenesis protein PilO1e-82305
NC_009434:608765:619031619031619654624Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein PilO7e-82303
NC_015740:636667:645935645935646450516Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype 4 fimbrial biogenesis protein PilO2e-66251
NC_007645:6096345:610715361071536107767615Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein PilO3e-56217
NC_007484:266594:274825274825275433609Nitrosococcus oceani ATCC 19707, complete genomePilus assembly protein, PilO3e-45181
NC_014315:352395:363172363172363780609Nitrosococcus watsoni C-113 chromosome, complete genomePilus assembly protein PilO2e-44179
NC_007912:3403101:341392434139243414538615Saccharophagus degradans 2-40, complete genomeProtein of unknown function UPF00443e-39161
NC_016616:1233555:124199912419991242682684Dechlorosoma suillum PS chromosome, complete genomeTfp pilus assembly protein PilO1e-36152
NC_007298:219783:228388228388229071684Dechloromonas aromatica RCB, complete genomePilus assembly protein, PilO1e-34146
NC_008344:1899317:191627219162721916922651Nitrosomonas eutropha C91, complete genomePilus assembly protein, PilO3e-34144
NC_015731:2950874:295350329535032954117615Nitrosomonas sp. Is79A3 chromosome, complete genomePilus assembly protein PilO2e-33142
NC_015572:293665:309409309409310041633Methylomonas methanica MC09 chromosome, complete genomePilus assembly protein PilO3e-30131
NC_015563:1172745:118036911803691181046678Delftia sp. Cs1-4 chromosome, complete genomePilus assembly protein PilO6e-30130
NC_010002:6189733:620325662032566203933678Delftia acidovorans SPH-1, complete genomePilus assembly protein PilO6e-30130
NC_013722:2784000:280801928080192808690672Xanthomonas albilineans, complete genomeprobable pilus iv assembly membrane protein pilo1e-29129
NC_008786:18688:302973029730968672Verminephrobacter eiseniae EF01-2, complete genomePilus assembly protein, PilO3e-27121
NC_008782:752686:770894770894771568675Acidovorax sp. JS42, complete genomePilus assembly protein, PilO1e-26119
NC_008781:708811:717000717000717674675Polaromonas naphthalenivorans CJ2, complete genomePilus assembly protein, PilO1e-26119
NC_011992:717107:729554729554730228675Acidovorax ebreus TPSY, complete genomePilus assembly protein PilO2e-26119
NC_008825:3298506:331121633112163311938723Methylibium petroleiphilum PM1, complete genomefimbrial assembly protein1e-23109
NC_009483:2086021:209949020994902100089600Geobacter uraniireducens Rf4 chromosome, complete genomepilus assembly protein, PilO1e-1686.3
NC_010814:1739706:174916817491681749773606Geobacter lovleyi SZ, complete genomePilus assembly protein PilO3e-1685.1
NC_008609:1027838:103878010387801039385606Pelobacter propionicus DSM 2379, complete genomePilus assembly protein, PilO9e-1580.1
NC_011979:3341099:335396333539633354562600Geobacter sp. FRC-32, complete genomePilus assembly protein PilO2e-1479
NC_007498:2475781:248836924883692488980612Pelobacter carbinolicus DSM 2380, complete genomepilus assembly protein, PilO-like1e-1376.3
NC_014972:3688000:370141237014123702053642Desulfobulbus propionicus DSM 2032 chromosome, complete genomefimbrial assembly protein PilO5e-1374.3
NC_015711:8909256:891996489199648920590627Myxococcus fulvus HW-1 chromosome, complete genometype IV pilus biogenesis protein PilO5e-1064.3
NC_008095:7139056:714973771497377150354618Myxococcus xanthus DK 1622, complete genometype IV pilus biogenesis protein PilO1e-0859.7