Pre_GI: BLASTP Hits

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Query: NC_009439:574437:582005 Pseudomonas mendocina ymp, complete genome

Start: 582005, End: 582577, Length: 573

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015740:636667:645255645255645827573Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype 4 fimbrial biogenesis protein PilN3e-77287
NC_009434:608765:618462618462619034573Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein PilN7e-77286
NC_007645:6096345:610776961077696108335567Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein PilN5e-46183
NC_007912:3403101:341454034145403415103564Saccharophagus degradans 2-40, complete genomeperiplasmic sensor signal transduction histidine kinase6e-37153
NC_015572:293665:308840308840309412573Methylomonas methanica MC09 chromosome, complete genomeFimbrial assembly family protein9e-31132
NC_008344:1899317:191691919169191917530612Nitrosomonas eutropha C91, complete genomeFimbrial assembly family protein4e-29127
NC_015731:2950874:295413129541312954721591Nitrosomonas sp. Is79A3 chromosome, complete genomeFimbrial assembly family protein4e-29127
NC_007298:219783:227822227822228391570Dechloromonas aromatica RCB, complete genomeFimbrial assembly8e-29126
NC_013722:2784000:280868728086872809445759Xanthomonas albilineans, complete genomeprobable type iv pilus assembly protein piln7e-27120
NC_007484:266594:274250274250274825576Nitrosococcus oceani ATCC 19707, complete genomeType 4 fimbrial biogenesis protein PilN5e-26117
NC_016616:1233555:124143312414331242002570Dechlorosoma suillum PS chromosome, complete genomeTfp pilus assembly protein PilN4e-26117
NC_014315:352395:362597362597363172576Nitrosococcus watsoni C-113 chromosome, complete genomefimbrial assembly family protein2e-25115
NC_015563:1172745:117975811797581180369612Delftia sp. Cs1-4 chromosome, complete genomeFimbrial assembly family protein5e-23107
NC_010002:6189733:620393362039336204544612Delftia acidovorans SPH-1, complete genomeFimbrial assembly family protein7e-23106
NC_008781:708811:716487716487716978492Polaromonas naphthalenivorans CJ2, complete genomeFimbrial assembly family protein2e-2098.2
NC_008786:18688:309703097031593624Verminephrobacter eiseniae EF01-2, complete genomeFimbrial assembly family protein5e-2097.4
NC_008782:752686:770281770281770892612Acidovorax sp. JS42, complete genomeFimbrial assembly family protein3e-1994.7
NC_011992:717107:728941728941729552612Acidovorax ebreus TPSY, complete genomeFimbrial assembly family protein4e-1994.4
NC_008825:3298506:331194933119493312593645Methylibium petroleiphilum PM1, complete genomefimbrial assembly protein2e-1891.7