Pre_GI: BLASTP Hits

Some Help

Query: NC_009439:442890:445775 Pseudomonas mendocina ymp, complete genome

Start: 445775, End: 447148, Length: 1374

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020209:945000:9641209641209654931374Pseudomonas poae RE*1-1-14, complete genomehypothetical protein0786
NC_007508:3183631:3209984320998432113691386Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein2e-164578
NC_017271:2935643:2985590298559029869751386Xanthomonas campestris pv. raphani 756C chromosome, completedecarboxylase family protein9e-164577
NC_003919:3113343:3128921312892131302671347Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein2e-163576
NC_017267:2955946:2971156297115629725411386Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completedecarboxylase family protein9e-163573
NC_010688:1908012:1915853191585319172381386Xanthomonas campestris pv. campestris, complete genomehypothetical protein1e-162572
NC_007086:1936505:1944031194403119453771347Xanthomonas campestris pv. campestris str. 8004, complete genomehypothetical protein7e-162570
NC_014924:936158:9395919395919409731383Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeConserved hypothetical protein CHP007304e-160564
NC_009654:4253431:4274002427400242753721371Marinomonas sp. MWYL1, complete genomehypothetical protein1e-159563
NC_016147:2471451:2483347248334724847291383Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative lysine decarboxylase protein4e-158558
NC_010717:3564955:3579168357916835805531386Xanthomonas oryzae pv. oryzae PXO99A, complete genomedecarboxylase family protein2e-156552
NC_007705:3429493:3443803344380334451881386Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein2e-156552
NC_006834:3422985:3439536343953634409211386Xanthomonas oryzae pv. oryzae KACC10331, complete genomehypothetical protein2e-156552
NC_008321:3232000:3240378324037832417331356Shewanella sp. MR-4, complete genomeconserved hypothetical protein 7307e-152537
NC_009092:3239500:3259149325914932605011353Shewanella loihica PV-4, complete genomeconserved hypothetical protein 7302e-148525
NC_009655:1357486:1357486135748613588531368Actinobacillus succinogenes 130Z chromosome, complete genomehypothetical protein3e-133475
NC_013943:1381000:138172513817251382414690Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomehypothetical protein5e-0756.2