Pre_GI: BLASTP Hits

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Query: NC_009439:2427120:2433238 Pseudomonas mendocina ymp, complete genome

Start: 2433238, End: 2434386, Length: 1149

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015379:2482901:2490622249062224918001179Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative xanthine dehydrogenase accessory factor2e-99362
NC_002947:2809591:2827822282782228290301209Pseudomonas putida KT2440, complete genomexanthine dehydrogenase accessory factor, putative5e-94345
NC_007412:147757:1530111530111541711161Anabaena variabilis ATCC 29413 plasmid C, complete sequenceProtein of unknown function DUF1827e-54211
NC_020210:2133996:2191447219144721925381092Geobacillus sp. GHH01, complete genomexanthine dehydrogenase4e-43175
NC_008571:505776:5197245197245208781155Gramella forsetii KT0803, complete genomeXdhC/CoxI type molybdenum-dependent oxidoreducta se accessory protein1e-39164
NC_008578:1827605:1832649183264918337221074Acidothermus cellulolyticus 11B, complete genomeprotein of unknown function DUF1822e-34147
NC_009725:3809403:3815601381560138166171017Bacillus amyloliquefaciens FZB42, complete genomeputative xanthine dehydrogenase2e-33143
NC_019842:3852062:3857662385766238592961635Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,xanthine dehydrogenase3e-33142
NC_012522:2931910:2947922294792229490551134Rhodococcus opacus B4, complete genomehypothetical protein4e-33142
NC_020272:84227:1049041049041059201017Bacillus amyloliquefaciens IT-45, complete genomexanthine dehydrogenase accessory factor1e-32141
NC_017191:3841170:3847390384739038484121023Bacillus amyloliquefaciens XH7 chromosome, complete genomexanthine dehydrogenase4e-32139
NC_017188:3839478:3845698384569838467201023Bacillus amyloliquefaciens TA208 chromosome, complete genomexanthine dehydrogenase subunit A4e-32139
NC_020410:3801583:3807781380778138087971017Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative xanthine dehydrogenase subunit A9e-32137
NC_014831:1818968:1834309183430918356251317Thermaerobacter marianensis DSM 12885 chromosome, complete genomeprotein of unknown function DUF1822e-31137
NC_020210:1275031:134624813462481347150903Geobacillus sp. GHH01, complete genomexanthine dehydrogenase2e-31137
NC_014829:988980:1007819100781910089071089Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeXanthine dehydrogenase1e-29130
NC_017190:3879148:390534139053413906288948Bacillus amyloliquefaciens LL3 chromosome, complete genomexanthine dehydrogenase subunit A2e-29130
NC_014551:3864127:389032038903203891267948Bacillus amyloliquefaciens DSM 7, complete genomexanthine dehydrogenase subunit A2e-29130
NC_009092:2644164:2647733264773326488301098Shewanella loihica PV-4, complete genomeprotein of unknown function DUF1829e-29128
NC_020291:744329:7635927635927646201029Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeputative xanthine dehydrogenase subunit A2e-27123
NC_008554:1623041:1625775162577516268151041Syntrophobacter fumaroxidans MPOB, complete genomeprotein of unknown function DUF1826e-27122
NC_013209:2582878:2616172261617226172631092Acetobacter pasteurianus IFO 3283-01, complete genomexanthine dehydrogenase accessory factor XdhC/CoxI9e-27121
NC_014831:2082304:2106054210605421072081155Thermaerobacter marianensis DSM 12885 chromosome, complete genomeprotein of unknown function DUF1823e-25116
NC_007777:2749422:2770221277022127714981278Frankia sp. CcI3, complete genomeprotein of unknown function DUF1827e-25115
NC_010125:955863:9585109585109595831074Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein5e-24112
NC_016027:2446806:2448961244896124500461086Gluconacetobacter xylinus NBRC 3288, complete genomexanthine dehydrogenase accessory factor CoxI8e-24111
NC_014328:2643588:2661029266102926621081080Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative molybdenum dehydrogenase accessory protein1e-23110
NC_010718:2337209:234696923469692347766798Natranaerobius thermophilus JW/NM-WN-LF, complete genomeprotein of unknown function DUF1824e-23108
NC_014960:1670778:1679198167919816802261029Anaerolinea thermophila UNI-1, complete genomeXdhC_ CoxI family protein6e-23108
NC_015519:426948:457465457465458295831Tepidanaerobacter sp. Re1 chromosome, complete genomeXshC-Cox1-family protein2e-22107
NC_020409:1956485:196281119628111963800990Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completehypothetical protein1e-22107
NC_018866:108812:1383621383621394891128Dehalobacter sp. DCA chromosome, complete genomeXanthine and CO dehydrogenases maturation factor, XdhC/CoxF family3e-22106
NC_018867:179975:2059572059572070841128Dehalobacter sp. CF chromosome, complete genomeXanthine and CO dehydrogenases maturation factor, XdhC/CoxF family3e-22106
NC_021182:401129:4011294011294021421014Clostridium pasteurianum BC1, complete genomexanthine and CO dehydrogenases maturation factor, XdhC/CoxF family4e-21102
NC_006138:273237:2826352826352836511017Desulfotalea psychrophila LSv54, complete genomehypothetical protein5e-21102
NC_014328:2643588:2650371265037126514291059Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative molybdenum dehydrogenase accessory protein2e-20100
NC_013216:3625830:3631102363110236321661065Desulfotomaculum acetoxidans DSM 771, complete genomeprotein of unknown function DUF1821e-1997.8
NC_014310:1130344:1132551113255111335581008Ralstonia solanacearum PSI07 megaplasmid, complete sequencecarbon monoxide dehydrogenase accessory protein (coxi)2e-1997.1
NC_018870:115982:150738150738151529792Thermacetogenium phaeum DSM 12270 chromosome, complete genomeputative xanthine dehydrogenase accessory factor XdhC2e-1997.1
NC_014006:1862000:186710618671061868047942Sphingobium japonicum UT26S chromosome 1, complete genomexanthine dehydrogenase accessory factor2e-1894
NC_015422:4508028:4528091452809145291311041Alicycliphilus denitrificans K601 chromosome, complete genomeXshC-Cox1 family protein4e-1892.8
NC_013943:124500:130479130479131270792Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomehypothetical protein2e-1790.1
NC_020126:4622371:462619246261924627025834Myxococcus stipitatus DSM 14675, complete genomeputative xanthine dehydrogenase accessory factor3e-1789.7
NC_011071:2207385:2230583223058322316441062Stenotrophomonas maltophilia R551-3, complete genomeprotein of unknown function DUF1822e-1584
NC_012796:4075583:4190014419001441911171104Desulfovibrio magneticus RS-1, complete genomehypothetical protein2e-1583.6
NC_009454:1577319:1603053160305316041951143Pelotomaculum thermopropionicum SI, complete genomexanthine and CO dehydrogenases maturation factor6e-1582.4
NC_018664:3009166:303798030379803038804825Clostridium acidurici 9a chromosome, complete genomexanthine dehydrogenase accessory factor XdhC1e-1480.9
NC_015947:2231493:2248611224861122496721062Burkholderia sp. JV3 chromosome, complete genomeXshC-Cox1-family protein2e-1480.5
NC_019908:2401577:242873924287392429605867Brachyspira pilosicoli P43/6/78 chromosome, complete genomehypothetical protein5e-1479.3
NC_003295:659837:676315676315677253939Ralstonia solanacearum GMI1000, complete genomehypothetical protein6e-1478.6
NC_014330:768232:791498791498792364867Brachyspira pilosicoli 95/1000 chromosome, complete genomehypothetical protein8e-1478.6
NC_018607:2111581:213479621347962135389594Brachyspira pilosicoli B2904 chromosome, complete genomedehydrogenase accessory protein9e-1478.2
NC_018643:320197:330196330196330876681Alpha proteobacterium HIMB5 chromosome, complete genomeputative sulfurylase large subunit, molybdopterin cytosine dinucleotide biosynthesis9e-1478.2
NC_011761:684969:707543707543708484942Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completexanthine dehydrogenase accessory factor1e-1377.8
NC_011206:863987:886561886561887502942Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF1821e-1377.8
NC_014910:2045088:2048742204874220497821041Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein6e-1375.5
NC_015422:2326942:2330596233059623316361041Alicycliphilus denitrificans K601 chromosome, complete genomeXshC-Cox1 family protein6e-1375.5
NC_018867:179975:194493194493195317825Dehalobacter sp. CF chromosome, complete genomeputative xanthine dehydrogenase accessory factor subfamily, putative1e-1171.2
NC_018866:108812:126898126898127722825Dehalobacter sp. DCA chromosome, complete genomeXanthine and CO dehydrogenases maturation factor, XdhC/CoxF family1e-1171.2
NC_016002:2825017:284150928415092842390882Pseudogulbenkiania sp. NH8B, complete genomehypothetical protein3e-1066.6
NC_002754:2621884:263176426317642632567804Sulfolobus solfataricus P2, complete genomehypothetical protein3e-1066.6
NC_012589:2379709:238700623870062387809804Sulfolobus islandicus L.S.2.15, complete genomehypothetical protein5e-1065.9
NC_012588:2249874:225568422556842256487804Sulfolobus islandicus M.14.25 chromosome, complete genomehypothetical protein5e-1065.9
NC_012622:2319598:233063623306362331439804Sulfolobus islandicus Y.G.57.14 chromosome, complete genomehypothetical protein5e-1065.9
NC_012632:2352784:235889523588952359698804Sulfolobus islandicus M.16.27 chromosome, complete genomehypothetical protein5e-1065.9
NC_012726:2249831:225594522559452256748804Sulfolobus islandicus M.16.4 chromosome, complete genomehypothetical protein5e-1065.9
NC_013769:2363980:237007823700782370881804Sulfolobus islandicus L.D.8.5 chromosome, complete genomexanthine dehydrogenase accessory factor5e-1065.9
NC_012623:277113:290387290387291190804Sulfolobus islandicus Y.N.15.51 chromosome, complete genomehypothetical protein1e-0964.3
NC_017275:2283074:228935422893542290157804Sulfolobus islandicus HVE10/4 chromosome, complete genomexanthine dehydrogenase accessory factor1e-0964.3
NC_017276:2161535:216781521678152168618804Sulfolobus islandicus REY15A chromosome, complete genomexanthine dehydrogenase accessory factor1e-0964.3
NC_015566:2420287:242267324226732423449777Serratia sp. AS12 chromosome, complete genomexanthine dehydrogenase accessory protein XdhC8e-0961.6
NC_015567:2420169:242255524225552423331777Serratia sp. AS9 chromosome, complete genomexanthine dehydrogenase accessory protein XdhC8e-0961.6
NC_015559:1478114:150203015020301502896867Marinomonas posidonica IVIA-Po-181 chromosome, complete genomexanthine dehydrogenase accessory protein XdhC2e-0860.8
NC_003911:2540453:254045325404532541235783Silicibacter pomeroyi DSS-3, complete genomecarbon monoxide dehydrogenase F protein4e-0859.3
NC_015851:10915:249812498125940960Acidithiobacillus caldus SM-1 megaplasmid, complete sequencehypothetical protein8e-0651.6