Pre_GI: BLASTP Hits

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Query: NC_009439:1075170:1086702 Pseudomonas mendocina ymp, complete genome

Start: 1086702, End: 1087262, Length: 561

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015740:926920:937567937567938124558Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype IV pilus modification protein PilV6e-64243
NC_018080:5192264:520013452001345200658525Pseudomonas aeruginosa DK2 chromosome, complete genometype IV pilus modification protein PilV8e-34143
NC_009434:1068281:107885110788511079432582Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein PilV6e-1890.5
NC_015410:1144272:115488911548891155404516Pseudomonas mendocina NK-01 chromosome, complete genometype IV pilus modification protein PilV9e-1786.7