Pre_GI: BLASTP Hits

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Query: NC_009439:101174:113794 Pseudomonas mendocina ymp, complete genome

Start: 113794, End: 114204, Length: 411

Host Lineage: Pseudomonas mendocina; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Soil and subsurface bacterium. Strain ymp was isolated as part of the Yucca Mountain Project from sediment in a surface holding pond of a drilling operation at the Nevada Test Site, NV, USA (the proposed site of the high-level nuclear repository). Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. Pseudomonas mendocina is a pentachlorophenol (PCP)-degrading bacterium was isolated from PCP-contaminated soil. It is able to act as a bioremediation agent without the accumulation of inhibitory toxic compounds.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:5916711:593202959320295932424396Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein7e-2199
NC_004578:5916711:592807159280715928466396Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein1e-1995.5
NC_004547:2470978:247953024795302479928399Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein3e-1063.9
NC_016816:1823127:183539218353921835793402Pantoea ananatis LMG 5342, complete genometype VI secretion system-associated hypothetical protein6e-0959.7
NC_014306:679888:691018691018691419402Erwinia billingiae Eb661, complete genomeexported protein3e-0754.3
NC_008570:2014151:202430720243072024711405Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein9e-0752.4