Pre_GI: BLASTP Hits

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Query: NC_009438:3019552:3022566 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 3022566, End: 3023015, Length: 450

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009997:3661083:367154336715433671992450Shewanella baltica OS195, complete genomeprotein of unknown function DUF4002e-77286
NC_009092:1504363:155028915502891550735447Shewanella loihica PV-4, complete genomeprotein of unknown function DUF4002e-63240
NC_010334:1701957:171904917190491719495447Shewanella halifaxensis HAW-EB4, complete genomeprotein of unknown function DUF4001e-59228
NC_008700:2788363:278791127879112788366456Shewanella amazonensis SB2B, complete genomeconserved hypothetical protein2e-59227
NC_014541:2978500:298216929821692982615447Ferrimonas balearica DSM 9799 chromosome, complete genomeprotein of unknown function DUF4008e-39158
NC_011138:3182807:318328531832853183770486Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein3e-38156
NC_008570:1143578:118913911891391189570432Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein7e-24109
NC_020911:2921925:296502429650242965539516Octadecabacter antarcticus 307, complete genomeputative DUF400 family protein5e-1683.2
NC_009654:4253431:426294242629424263571630Marinomonas sp. MWYL1, complete genomehypothetical protein1e-0961.6
NC_004917:946550:950049950049950747699Helicobacter hepaticus ATCC 51449, complete genomehypothetical protein8e-0752.8