Pre_GI: BLASTP Hits

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Query: NC_009438:3019552:3020677 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 3020677, End: 3021384, Length: 708

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009997:3661083:366985736698573670564708Shewanella baltica OS195, complete genomeflagella basal body P-ring formation protein FlgA1e-106385
NC_009092:1504363:155168815516881552395708Shewanella loihica PV-4, complete genomeSAF domain protein5e-73273
NC_010334:1701957:172115317211531721926774Shewanella halifaxensis HAW-EB4, complete genomeSAF domain protein6e-72270
NC_014541:2978500:298045629804562981160705Ferrimonas balearica DSM 9799 chromosome, complete genomeflagella basal body P-ring formation protein FlgA8e-37153
NC_015424:2917817:292955929295592930242684Aeromonas veronii B565 chromosome, complete genomeflagellar basal body P-ring biosynthesis protein FlgA3e-28125
NC_007484:3035068:303986530398653040572708Nitrosococcus oceani ATCC 19707, complete genomeFlageller protein FlgA4e-1788.6
NC_013851:759500:775439775439776176738Allochromatium vinosum DSM 180 chromosome, complete genomeflagella basal body P-ring formation protein FlgA1e-1066.6
NC_009831:66518:799587995880704747Shewanella sediminis HAW-EB3, complete genomeSAF domain8e-0857.4