Pre_GI: BLASTP Hits

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Query: NC_009438:2939478:2939478 Shewanella putrefaciens CN-32 chromosome, complete genome

Start: 2939478, End: 2939780, Length: 303

Host Lineage: Shewanella putrefaciens; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Shewanella putrefaciens is a Gram-negative bacterium. It has been isolated from marine environments, as well as from anaerobic sandstone in the Morrison formation in New Mexico, USA. S. putrefaciens is also a facultative anaerobe with the ability to reduce iron and manganese metabolically; that is, it can use iron and manganese as the terminal electron acceptor in the electron transport chain (in contrast to obligate aerobes which must use oxygen for this purpose). It is also one of the organisms associated with the odor of rotting fish, as it is a marine organism which produces trimethylamines (hence the species name putrefaciens, from putrid). This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. This species, along with Shewanella algae, are the only Shewanella spp. to be found in clinical speciments. Normally found in marine environments in warmer temperatures, infections seem to occur more frequently in countries with a warm climate and in other countries during warm summer months.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008750:1659095:167439716743971674699303Shewanella sp. W3-18-1, complete genomeExcinuclease ABC, C subunit domain protein6e-55212
NC_008750:1659095:166454716645471664855309Shewanella sp. W3-18-1, complete genomeExcinuclease ABC, C subunit domain protein4e-51199
NC_015731:3658956:367158936715893671888300Nitrosomonas sp. Is79A3 chromosome, complete genomeExcinuclease ABC C subunit domain-containing protein2e-28124
NC_014761:1405408:141413814141381414419282Oceanithermus profundus DSM 14977 chromosome, complete genomeexcinuclease ABC c subunit domain protein2e-27121
NC_015581:1043394:105239210523921052676285Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeExcinuclease ABC C subunit domain-containing protein8e-27119
NC_014965:2954876:296158129615812961865285Vibrio vulnificus MO6-24/O chromosome I, complete sequenceexcinuclease ABC C subunit-like protein7e-26115
NC_004459:767127:773834773834774118285Vibrio vulnificus CMCP6 chromosome I, complete sequencePredicted endonuclease2e-25114
NC_016937:1625752:164607716460771646361285Francisella tularensis subsp. tularensis TI0902 chromosome,Excinuclease ABC C subunit-like protein3e-23107
NC_016933:1702500:172198417219841722268285Francisella tularensis TIGB03 chromosome, complete genomeExcinuclease ABC C subunit-like protein3e-23107
NC_006570:1625909:164623416462341646518285Francisella tularensis subsp. tularensis Schu 4, complete genomeEndonuclease3e-23107
NC_008245:1625715:164604016460401646324285Francisella tularensis subsp. tularensis FSC 198, complete genomeEndonuclease3e-23107
NC_015638:2588954:260368026036802603982303Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeExcinuclease ABC C subunit domain-containing protein1e-22105
NC_009767:2866668:287592928759292876252324Roseiflexus castenholzii DSM 13941, complete genomeExcinuclease ABC C subunit domain protein1e-22105
NC_014761:1795304:180840118084011808682282Oceanithermus profundus DSM 14977 chromosome, complete genomeexcinuclease ABC c subunit domain protein8e-2199
NC_009720:2424975:243072724307272431023297Xanthobacter autotrophicus Py2, complete genomeexcinuclease ABC subunit C1e-2098.2
NC_007109:1105251:111997211199721120274303Rickettsia felis URRWXCal2, complete genomeExcinuclease ABC, C subunit, N-terminal9e-2095.5
NC_017025:1735835:174555617455561745864309Flavobacterium indicum GPTSA100-9, complete genomehypothetical protein1e-1995.1
NC_002696:3759551:376187837618783762249372Caulobacter crescentus CB15, complete genomehypothetical protein8e-1992.4
NC_015638:1824794:183982118398211840108288Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeExcinuclease ABC C subunit domain-containing protein3e-1890.5
NC_013410:3192836:320742432074243207714291Fibrobacter succinogenes subsp. succinogenes S85 chromosome,excinuclease ABC C subunit domain protein1e-1788.6
NC_015177:1476073:149578214957821496099318Pedobacter saltans DSM 12145 chromosome, complete genomeExcinuclease ABC C subunit domain protein3e-1580.5
NC_013171:1364464:137480013748001375090291Anaerococcus prevotii DSM 20548, complete genomeExcinuclease ABC C subunit domain protein5e-1579.7
NC_019904:5241444:526542852654285265733306Echinicola vietnamensis DSM 17526 chromosome, complete genomeendonuclease containing a URI domain4e-1373.2
NC_016610:609961:612219612219612920702Tannerella forsythia ATCC 43037 chromosome, complete genomeGIY-YIG catalytic domain-containing protein8e-1062.4