Pre_GI: BLASTP Hits

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Query: NC_009381:1682000:1682016 Yersinia pestis Pestoides F chromosome, complete genome

Start: 1682016, End: 1683617, Length: 1602

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Atypical strain isolated from the former Soviet Union, USSR. This strain lacks a plasminogen activator and is virulent by the aerosol route. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009708:2788855:2815051281505128166521602Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeImpA domain-containing protein0927
NC_010465:2820500:2845578284557828471791602Yersinia pseudotuberculosis YPIII, complete genometype VI secretion-associated protein, VC_A0119 family0923
NC_017060:125480:1543521543521559561605Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion-associated protein0640
NC_012962:4427000:4435406443540644370071602Photorhabdus asymbiotica, complete genomehypothetical protein3e-157555
NC_008563:3119284:3139452313945231410891638Escherichia coli APEC O1, complete genomehypothetical protein6e-152538
NC_016612:28451:5557555575571491575Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein2e-151536
NC_014121:1822895:1838342183834218399401599Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein VasJ3e-148525
NC_013956:4579759:4578161457816145797621602Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein4e-148525
NC_009648:1487692:1508599150859915101971599Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-144513
NC_012731:2302974:2321926232192623235241599Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-144512
NC_010501:3575726:3578580357858035801661587Pseudomonas putida W619, complete genometype VI secretion-associated protein, VC_A0119 family3e-140498
NC_014837:3766426:3790283379028337918601578Pantoea sp. At-9b chromosome, complete genometype VI secretion-associated protein6e-133474
NC_014118:1171411:1171411117141111729971587Burkholderia sp. CCGE1002 chromosome chromosome 2, completetype VI secretion-associated protein, VC_A0119 family3e-92339
NC_007348:2011957:2029244202924420308181575Ralstonia eutropha JMP134 chromosome 2, complete sequenceImpA, N-terminal1e-91337
NC_012721:1395417:1397244139724413988301587Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-91337
NC_010552:592154:6109656109656125481584Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion-associated protein, VC_A0119 family7e-88325
NC_009436:3117661:3152243315224331546182376Enterobacter sp. 638, complete genomeImpA domain-containing protein1e-68261
NC_016612:5600177:560294756029475603309363Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-28127
NC_016612:5600177:560276356027635602957195Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-1688.6
NC_007517:306508:3065083065083088802373Geobacter metallireducens GS-15, complete genomeImpA-like4e-1480.1
NC_009648:3476000:349049334904933490885393Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-0860.8
NC_009656:3733913:3744965374496537465211557Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein5e-0756.2