Pre_GI: BLASTP Hits

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Query: NC_009140:121107:140839 Salmonella enterica enterica sv Newport str. SL254, complete

Start: 140839, End: 141321, Length: 483

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Newport is common worldwide. Outbreak investigations and targeted studies have identified dairy cattle as the main reservoir this serotype. The SL254 strain is an MDR strain from one of two distinct lineages of the Newport serovar. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete2e-70263
NC_009349:78000:8685886858885731716Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTniA protein1e-69261
NC_016860:4055117:4082776408277640844551680Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase TniA2e-69261
NC_017986:1885613:1888422188842218901011680Pseudomonas putida ND6 chromosome, complete genomeTniA3e-62236
NC_016616:2644883:2650240265024026519221683Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase7e-59225
NC_013235:3913000:3930560393056039322241665Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region6e-32136
NC_014215:2259290:2281505228150522832051701Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,TniA protein7e-31132
NC_019673:6394319:6402870640287064042431374Saccharothrix espanaensis DSM 44229 complete genomeputative integrase1e-29128
NC_007498:134442:1538771538771557541878Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein2e-1684.7
NC_008782:1277117:1296668129666812983381671Acidovorax sp. JS42, complete genomeIntegrase, catalytic region3e-1684.3
NC_009348:1064664:1073012107301210748921881Aeromonas salmonicida subsp. salmonicida A449, complete genomeTniA transposase2e-1478.2
NC_010120:1065833:1074745107474510762891545Neisseria meningitidis 053442, complete genomeconserved hypothetical protein2e-1375.1
NC_014752:1063506:1072340107234010735271188Neisseria lactamica ST-640, complete genomeintegrase4e-1373.9
NC_011761:2217632:2229241222924122311211881Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetransposon transposition protein B6e-1373.2
NC_020409:2222000:2225628222562822275471920Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegrase catalytic region2e-1271.6
NC_007912:231817:2359352359352377701836Saccharophagus degradans 2-40, complete genomeUrease, beta subunit3e-1270.9
NC_016616:915755:9399229399229418231902Dechlorosoma suillum PS chromosome, complete genomeintegrase family protein2e-1168.6
NC_012856:207194:2113422113422132341893Ralstonia pickettii 12D chromosome 1, complete genomeIntegrase catalytic region4e-1063.9
NC_005773:208000:221146221146221817672Pseudomonas syringae pv. phaseolicola 1448A, complete genome6e-1063.2
NC_010939:405477:4235454235454254731929Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative transposase1e-0962
NC_009254:637952:6919556919556935831629Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit3e-0960.8
NC_012440:1215838:1236077123607712379361860Persephonella marina EX-H1, complete genomeTniA transposase5e-0960.1
NC_012856:2633890:2649928264992826518261899Ralstonia pickettii 12D chromosome 1, complete genomeTniA transposase7e-0959.7
NC_010682:1763769:1768716176871617706381923Ralstonia pickettii 12J chromosome 1, complete sequenceTniA transposase1e-0858.9
NC_010682:3033646:3051516305151630534381923Ralstonia pickettii 12J chromosome 1, complete sequenceTniA transposase1e-0858.9
NC_017162:270460:2739922739922759021911Acinetobacter baumannii 1656-2 chromosome, complete genometransposase2e-0858.5
NC_010682:1652636:1669589166958916715111923Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein3e-0857.8
NC_017387:247462:2474622474622493721911Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometransposition protein B5e-0856.6
NC_010410:3606826:3693499369349936954091911Acinetobacter baumannii AYE, complete genomeputative transposase7e-0856.2
NC_007517:3430237:3435106343510634370161911Geobacter metallireducens GS-15, complete genometransposase5e-0753.5
NC_013166:32474:3602436024378921869Kangiella koreensis DSM 16069, complete genomeTransposase-like Mu8e-0753.1
NC_007575:1663088:1667067166706716689231857Sulfurimonas denitrificans DSM 1251, complete genomeintegrase catalytic subunit9e-0752.8