Pre_GI: BLASTP Hits

Some Help

Query: NC_009092:4585784:4588165 Shewanella loihica PV-4, complete genome

Start: 4588165, End: 4588605, Length: 441

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004337:3590323:393328039332803933723444Shigella flexneri 2a str. 301, complete genomeflavodoxin3e-33140
NC_010694:1:11441441Erwinia tasmaniensis, complete genomeProtein mioC, involved in modulation of initiation at oriC1e-32138
NC_012214:1:11441441Erwinia pyrifoliae Ep1/96, complete genomeProtein mioC, involved in modulation of initiation at oriC2e-32137
NC_011852:1482343:148663314866331487076444Haemophilus parasuis SH0165, complete genomeflavodoxin3e-24110
NC_009053:1785447:178884117888411789284444Actinobacillus pleuropneumoniae L20, complete genomeflavodoxin6e-24109
NC_010278:1749579:174957917495791750022444Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,flavodoxin6e-24109
NC_014012:1421979:143324214332421433706465Shewanella violacea DSS12, complete genomeflavodoxin2e-23107
NC_010939:1809446:181284018128401813283444Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeflavodoxin3e-23107
NC_017353:361350:3807083807083825521845Staphylococcus lugdunensis N920143, complete genomeputative sulfite reductase [NADPH] flavoprotein alpha-component4e-1373.6
NC_011206:2685499:2707224270722427089901767Acidithiobacillus ferrooxidans ATCC 53993, complete genomeflavodoxin/nitric oxide synthase8e-1372.4
NC_011761:2785660:2807385280738528091511767Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completesulfite reductase (NADPH) flavoprotein subunit alpha8e-1372.4
NC_004757:905417:9283459283459301801836Nitrosomonas europaea ATCC 19718, complete genomeSulfite reductase flavoprotein subunit1e-1272
NC_020164:280087:2881032881032899531851Staphylococcus warneri SG1, complete genomeSulfite reductase [NADPH] flavoprotein alpha-component2e-1271.2
NC_007350:2460134:2471605247160524734341830Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,sulfite reductase flavoprotein subunit6e-1269.7
NC_013928:797714:802460802460802978519Streptococcus mutans NN2025, complete genomeflavodoxin3e-1064.3
NC_008570:3777469:3797999379799937997921794Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomesulfite reductase [NADPH] flavoprotein, alpha-component1e-0962
NC_013421:801542:8166088166088208314224Pectobacterium wasabiae WPP163, complete genomemolybdopterin oxidoreductase1e-0961.6
NC_009442:1446508:146623114662311466722492Streptococcus suis 05ZYH33 chromosome, complete genomeflavodoxin3e-0960.8
NC_012925:1357783:137753513775351377996462Streptococcus suis P1/7, complete genomeflavodoxin2e-0960.8
NC_012924:1446190:146594314659431466404462Streptococcus suis SC84, complete genomeflavodoxin2e-0960.8
NC_012926:1496510:151628315162831516744462Streptococcus suis BM407 chromosome, complete genomeflavodoxin2e-0960.8
NC_010468:1029471:1031501103150110333001800Escherichia coli ATCC 8739, complete genomesulfite reductase (NADPH) flavoprotein, alpha chain1e-0858.2
NC_012759:2757826:2773933277393327757321800Escherichia coli BW2952 chromosome, complete genomesulfite reductase subunit alpha2e-0858.2
NC_010473:2963951:2980663298066329824621800Escherichia coli str. K-12 substr. DH10B, complete genomesulfite reductase, alpha subunit, flavoprotein2e-0858.2
NC_000913:2873443:2888121288812128899201800Escherichia coli K12, complete genomesulfite reductase, alpha subunit, flavoprotein2e-0858.2
AC_000091:2872000:2888755288875528905541800Escherichia coli W3110 DNA, complete genomesulfite reductase, alpha subunit, flavoprotein2e-0858.2
NC_009443:1445936:146565214656521466143492Streptococcus suis 98HAH33, complete genomeflavodoxin3e-0857
NC_015224:889536:8912848912848930831800Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,sulfite reductase subunit alpha5e-0856.6
NC_013850:985331:9853319853319871301800Klebsiella variicola At-22 chromosome, complete genomesulfite reductase (NADPH) flavoprotein, alpha chain5e-0856.6
NC_009800:2889928:2907331290733129091301800Escherichia coli HS, complete genomesulfite reductase [NADPH] flavoprotein, alpha-component5e-0856.6
NC_018419:226000:2395632395632413711809Secondary endosymbiont of Ctenarytaina eucalypti chromosome,sulfite reductase (NADPH) flavoprotein, alpha-component9e-0855.8
NC_016906:2845424:2860325286032528619411617Gordonia polyisoprenivorans VH2 chromosome, complete genomesulfite reductase [NADPH] flavoprotein alpha-component CysJ4e-0753.5
NC_021175:353292:353292353292353735444Streptococcus oligofermentans AS 1.3089, complete genomeflavodoxin8e-0752.8
NC_002488:1430680:1448883144888314507211839Xylella fastidiosa 9a5c, complete genomeNADPH-sulfite reductase, flavoprotein subunit1e-0652
NC_007984:221030:2324162324162342031788Baumannia cicadellinicola str. Hc (Homalodisca coagulata), completesulfite reductase [NADPH] flavoprotein, alpha chain2e-0651.6
NC_010610:1580483:162637016263701626816447Lactobacillus fermentum IFO 3956, complete genomeflavodoxin4e-0650.1
NC_019896:2579036:258096525809652581501537Bacillus subtilis subsp. subtilis str. BSP1 chromosome, completeFlavodoxin-25e-0649.7
NC_008705:3430839:3449574344957434533893816Mycobacterium sp. KMS, complete genomemolybdopterin oxidoreductase6e-0649.7
NC_008146:3401743:3421292342129234251073816Mycobacterium sp. MCS, complete genomemolybdopterin oxidoreductase6e-0649.7
NC_009077:3376351:3395111339511133989263816Mycobacterium sp. JLS, complete genomemolybdopterin oxidoreductase9e-0648.9