Pre_GI: BLASTP Hits

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Query: NC_009092:4337617:4371745 Shewanella loihica PV-4, complete genome

Start: 4371745, End: 4372470, Length: 726

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017271:4193000:419482241948224195595774Xanthomonas campestris pv. raphani 756C chromosome, completeThiJ-PfpI family protein7e-34144
NC_010688:673454:700564700564701337774Xanthomonas campestris pv. campestris, complete genomehypothetical protein2e-33142
NC_016010:637535:655721655721656488768Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeintracellular protease/amidase1e-32140
NC_003902:4252000:425336342533634253956594Xanthomonas campestris pv. campestris str. ATCC 33913, completeThiJ/PfpI family protein1e-31136
NC_014643:195948:197344197344197985642Rothia dentocariosa ATCC 17931 chromosome, complete genometranscriptional regulator6e-30130
NC_008369:939356:955788955788956390603Francisella tularensis subsp. holarctica OSU18, complete genomepossible transcriptional regulator2e-27122
NC_007880:935670:952099952099952701603Francisella tularensis subsp. holarctica, complete genomeDJ-1/PfpI family protein2e-27122
NC_009749:937412:953847953847954449603Francisella tularensis subsp. holarctica FTA, complete genomeDJ-1/PfpI family protein2e-27122
NC_006570:529426:550625550625551227603Francisella tularensis subsp. tularensis Schu 4, complete genomeDJ-1/PfpI family protein4e-27121
NC_008245:529378:550577550577551179603Francisella tularensis subsp. tularensis FSC 198, complete genomeDJ-1/PfpI family protein4e-27121
NC_016933:608889:626554626554627156603Francisella tularensis TIGB03 chromosome, complete genomeThiJ PfpI family protein4e-27121
NC_016937:529459:550647550647551249603Francisella tularensis subsp. tularensis TI0902 chromosome,ThiJ PfpI family protein4e-27121
NC_021064:1705961:171849717184971719123627Propionibacterium avidum 44067, complete genomeThiJ/PfpI domain-containing protein4e-27121
NC_011386:2762886:276951627695162770220705Oligotropha carboxidovorans OM5, complete genomeputative isonitrile hydratase4e-1788.2
NC_015684:1343251:135420913542091354913705Oligotropha carboxidovorans OM5 chromosome, complete genomeThiJ/PfpI domain-containing protein4e-1788.2
NC_015514:2414617:243614924361492436748600Cellulomonas fimi ATCC 484 chromosome, complete genomeThiJ/PfpI domain-containing protein1e-1687
NC_014151:2312000:233071923307192331318600Cellulomonas flavigena DSM 20109 chromosome, complete genomeThiJ/PfpI domain protein1e-1686.7
NC_013440:8443451:845373184537318454354624Haliangium ochraceum DSM 14365, complete genomeThiJ/PfpI domain protein2e-1686.3
NC_015588:1965787:198411819841181984717600Isoptericola variabilis 225 chromosome, complete genomeThiJ/PfpI domain-containing protein3e-1685.5
NC_015671:1540860:154284915428491543448600Cellvibrio gilvus ATCC 13127 chromosome, complete genomeThiJ/PfpI domain-containing protein2e-1582.4
NC_010718:2265447:229220322922032292811609Natranaerobius thermophilus JW/NM-WN-LF, complete genomeThiJ/PfpI domain protein8e-1580.9
NC_018524:4988810:500711850071185007759642Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeDJ-1/PfpI family protein7e-1477.4
NC_010842:2310756:234081923408192341409591Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeTranscriptional regulator, ThiJ/PfpI family protein1e-1273.6
NC_010602:2244729:233543223354322336022591Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'hypothetical protein1e-1273.6
NC_008740:3259962:326856632685663269267702Marinobacter aquaeolei VT8, complete genomeThiJ/PfpI domain protein2e-1272.8
NC_015859:2726414:274168027416802742522843Corynebacterium variabile DSM 44702 chromosome, complete genomeThiJ/PfpI domain-containing protein4e-1272
NC_016109:327826:347961347961348593633Kitasatospora setae KM-6054, complete genomehypothetical protein7e-1270.9
NC_014550:3377834:339449033944903395332843Arthrobacter arilaitensis Re117, complete genomeputative AraC family transcriptional regulator1e-1170.1
NC_011000:1023800:102931910293191030002684Burkholderia cenocepacia J2315 chromosome 1, complete sequenceDJ-1/PfpI family protein2e-1169.7
NC_007492:2035761:205359520535952054281687Pseudomonas fluorescens PfO-1, complete genomeThiJ/PfpI3e-1168.9
NC_012880:2480000:249500024950002495701702Dickeya dadantii Ech703, complete genomeThiJ/PfpI domain protein5e-1168.2
NC_016947:70210:743867438675027642Mycobacterium intracellulare MOTT-02 chromosome, complete genomeDJ-1/PfpI family protein1e-1067
NC_017904:2724941:275344927534492754192744Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein5e-1064.7
NC_010084:695817:700555700555701523969Burkholderia multivorans ATCC 17616 chromosome 1, completeAraC family transcriptional regulator7e-1064.3
NC_010804:2808676:282325028232502824218969Burkholderia multivorans ATCC 17616 chromosome 1, completeAraC subfamily transcriptional regulator7e-1064.3
NC_011000:1023800:1030077103007710310931017Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein7e-1064.3
NC_007963:3113739:312177231217723122356585Chromohalobacter salexigens DSM 3043, complete genomeThiJ/PfpI1e-0963.5
NC_009256:3056000:306906630690663069749684Burkholderia vietnamiensis G4 chromosome 1, complete sequenceThiJ/PfpI domain-containing protein2e-0962.8
NC_013956:1762171:177798017779801778675696Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-0962.8
NC_010804:2808676:282433228243322825015684Burkholderia multivorans ATCC 17616 chromosome 1, completeputative intracellular protease/amidase3e-0962
NC_010084:695817:699758699758700441684Burkholderia multivorans ATCC 17616 chromosome 1, completeThiJ/PfpI domain-containing protein3e-0962
NC_009256:3056000:306798030679803068948969Burkholderia vietnamiensis G4 chromosome 1, complete sequencetranscriptional regulator5e-0961.6
NC_018524:4988810:500611750061175007007891Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomebacterial regulatory helix-turn-helix s, AraC family protein6e-0961.2
NC_016745:2280375:228821122882112288795585Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein6e-0961.2
NC_012583:361241:417672417672418268597Vibrio cholerae O395 chromosome chromosome II, complete sequenceThiJ/PfpI1e-0860.5
NC_009456:787322:845674845674846270597Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein1e-0860.5
NC_002506:370629:406385406385406981597Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein1e-0860.5
NC_008596:3404832:343870934387093439404696Mycobacterium smegmatis str. MC2 155, complete genomeisonitrile hydratase, putative1e-0860.1
NC_016945:370471:406223406223406801579Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein2e-0859.3
NC_009925:1003000:101366710136671014251585Acaryochloris marina MBIC11017, complete genomeDJ-1/PfpI family protein3e-0858.9
NC_015850:110364:159869159869160393525Acidithiobacillus caldus SM-1 chromosome, complete genomeThiJ/PfpI domain-containing protein5e-0858.2
NC_020388:2662947:266558126655812666159579Natronomonas moolapensis 8.8.11 complete genomeThiJ/PfpI domain protein5e-0858.2
NC_015953:4908069:493169249316924932666975Streptomyces sp. SirexAA-E chromosome, complete genomeAraC family transcriptional regulator6e-0857.8
NC_014166:2149984:215413621541362154717582Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeThiJ/PfpI domain-containing protein7e-0857.8
NC_012660:2684981:270841027084102709372963Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein1e-0757
NC_005125:2107088:212765221276522128500849Gloeobacter violaceus PCC 7421, complete genomeThiJ family protein1e-0757
NC_010162:8873051:8885884888588488869001017Sorangium cellulosum 'So ce 56', complete genomeAraC family transcriptional regulator2e-0756.2
NC_004369:531579:558983558983559948966Corynebacterium efficiens YS-314, complete genomehypothetical protein4e-0755.1
NC_007777:3000941:302074630207463021192447Frankia sp. CcI3, complete genomeThiJ/PfpI2e-0653.1
NC_011000:2732330:279213227921322793088957Burkholderia cenocepacia J2315 chromosome 1, complete sequenceAraC family regulatory protein2e-0652.4
NC_006582:3827844:383926738392673839881615Bacillus clausii KSM-K16, complete genometranscriptional regulator, AraC/XylS family3e-0652.4
NC_008596:3404832:3437657343765734386701014Mycobacterium smegmatis str. MC2 155, complete genometranscriptional regulator, AraC family protein4e-0651.6
NC_008268:361424:369410369410370369960Rhodococcus sp. RHA1, complete genometranscriptional regulator, AraC family5e-0651.6
NC_012988:1777618:1803166180316618041881023Methylobacterium extorquens DM4, complete genomeAraC family transcriptional regulator6e-0651.2