Pre_GI: BLASTP Hits

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Query: NC_009092:3057319:3070906 Shewanella loihica PV-4, complete genome

Start: 3070906, End: 3072132, Length: 1227

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008786:3045770:3063888306388830651291242Verminephrobacter eiseniae EF01-2, complete genomeputative phenylacetate-CoA ligase1e-101370
NC_014931:6203872:6208513620851362097571245Variovorax paradoxus EPS chromosome, complete genomeAMP-dependent synthetase and ligase2e-100365
NC_016803:2431672:2436907243690724381721266Desulfovibrio desulfuricans ND132 chromosome, complete genomeAMP-dependent synthetase and ligase5e-53208
NC_014844:3469848:3475669347566934769341266Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeAMP-dependent synthetase and ligase1e-52207
NC_013890:808791:8136918136918150101320Dehalococcoides sp. GT chromosome, complete genomePhenylacetate--CoA ligase8e-25115
NC_016027:2512297:2534465253446525357931329Gluconacetobacter xylinus NBRC 3288, complete genomephenylacetate-CoA ligase3e-22106
NC_013849:1034472:1056461105646110577561296Ferroglobus placidus DSM 10642 chromosome, complete genomeAMP-dependent synthetase and ligase7e-22105
NC_016629:415711:4356054356054368971293Desulfovibrio africanus str. Walvis Bay chromosome, completephenylacetate--CoA ligase6e-22105
NC_015499:1493500:1500640150064015019441305Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhenylacetate--CoA ligase5e-22105
NC_018876:2604055:2617254261725426185581305Methanolobus psychrophilus R15 chromosome, complete genomephenylacetate-CoA ligase1e-21104
NC_002570:207555:2130302130302143671338Bacillus halodurans C-125, complete genomephenylacetyl-CoA ligase in the phenylacetic acid catabolic pathway2e-20100
NC_017272:921193:9211939211939225271335Thermus thermophilus SG0.5JP17-16 chromosome, complete genomephenylacetate--CoA ligase2e-20100
NC_020409:363114:3655483655483668521305Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completePhenylacetate-coenzyme A ligase9e-2098.2
NC_015499:1493500:1504803150480315061101308Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhenylacetate--CoA ligase1e-1997.8
NC_018691:896464:9006069006069019011296Alcanivorax dieselolei B5 chromosome, complete genomePhenylacetate-CoA ligase2e-1997.1
NC_003552:4714457:4734881473488147361851305Methanosarcina acetivorans C2A, complete genomecoenzyme F390 synthetase5e-1995.9
NC_014253:575360:5820365820365833371302Methanohalobium evestigatum Z-7303 chromosome, complete genomePhenylacetate--CoA ligase6e-1995.5
NC_013170:311045:3116743116743129121239Cryptobacterium curtum DSM 15641, complete genomephenylacetate-CoA ligase9e-1995.1
NC_014722:1084616:1084616108461610859231308Burkholderia rhizoxinica HKI 454, complete genomeCoenzyme F390 Synthetase / phenylacetate-coenzyme A ligase1e-1894.7
NC_013741:302415:3191133191133203631251Archaeoglobus profundus DSM 5631, complete genomePhenylacetate--CoA ligase1e-1894.4
NC_015578:2026741:2074357207435720757031347Treponema primitia ZAS-2 chromosome, complete genomephenylacetate-coenzyme A ligase1e-1894.4
NC_009712:669647:6724826724826737831302Candidatus Methanoregula boonei 6A8, complete genomephenylacetate--CoA ligase3e-1893.2
NC_011979:3070110:3072583307258330738871305Geobacter sp. FRC-32, complete genomePhenylacetate--CoA ligase3e-1893.2
NC_015500:2329957:2352706235270623540281323Treponema brennaborense DSM 12168 chromosome, complete genomePhenylacetate--CoA ligase7e-1892
NC_011894:3475775:3482117348211734834481332Methylobacterium nodulans ORS 2060, complete genomephenylacetate-CoA ligase2e-1790.5
NC_020302:3014483:3038969303896930402821314Corynebacterium halotolerans YIM 70093 = DSM 44683, completephenylacetate-CoA ligase5e-1789.4
NC_009712:669647:6737836737836750541272Candidatus Methanoregula boonei 6A8, complete genomephenylacetate--CoA ligase5e-1789.4
NC_013204:74855:7619876198774391242Eggerthella lenta DSM 2243, complete genomePhenylacetate--CoA ligase3e-1686.7
NC_014228:4408500:4419780441978044211231344Xenorhabdus nematophila ATCC 19061, complete genomephenylacetyl-CoA ligase, phenylacetic acid degradation3e-1583.6
NC_015499:1640500:1654187165418716554491263Thermodesulfobium narugense DSM 14796 chromosome, complete genomePhenylacetate--CoA ligase4e-1583.2
NC_015733:2963548:2985941298594129872601320Pseudomonas putida S16 chromosome, complete genomephenylacetate-CoA ligase8e-1582
NC_009483:2489000:2490625249062524919291305Geobacter uraniireducens Rf4 chromosome, complete genomephenylacetate--CoA ligase1e-1481.3
NC_013892:114884:1197261197261210331308Xenorhabdus bovienii SS-2004 chromosome, complete genomephenylacetyl-CoA ligase, phenylacetic acid degradation2e-1480.9
NC_011979:3045952:3065023306502330663271305Geobacter sp. FRC-32, complete genomePhenylacetate--CoA ligase2e-1480.5
NC_016627:1960097:1982156198215619834601305Clostridium clariflavum DSM 19732 chromosome, complete genomecoenzyme F390 synthetase4e-1479.3
NC_009142:1242850:1244426124442612457481323Saccharopolyspora erythraea NRRL 2338, complete genomephenylacetate-coenzyme A ligase2e-1273.9
NC_008699:2260606:2277546227754622789641419Nocardioides sp. JS614, complete genomePhenylacetate--CoA ligase3e-1273.6
NC_009943:970901:9719049719049731991296Candidatus Desulfococcus oleovorans Hxd3, complete genomePhenylacetate--CoA ligase6e-1272.4
NC_015275:4577642:4586034458603445873501317Clostridium lentocellum DSM 5427 chromosome, complete genomePhenylacetate--CoA ligase1e-1171.6
NC_007953:938346:9538109538109552221413Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative coenzyme F390 synthetase II2e-1170.9
NC_016627:3158353:3166226316622631675451320Clostridium clariflavum DSM 19732 chromosome, complete genomecoenzyme F390 synthetase4e-1169.7
NC_015656:3200500:3211392321139232127711380Frankia symbiont of Datisca glomerata chromosome, complete genomePhenylacetate--CoA ligase9e-1168.6
NC_016610:795903:8005968005968019151320Tannerella forsythia ATCC 43037 chromosome, complete genomehypothetical protein3e-1067
NC_019673:1039258:1059925105992510613011377Saccharothrix espanaensis DSM 44229 complete genomePhenylacetate-CoA ligase1e-0964.7
NC_014623:7482229:7496365749636574976961332Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephenylacetate-CoA ligase2e-0964.3
NC_016885:1153277:1162327116232711636311305Pyrobaculum oguniense TE7 chromosome, complete genomeCoenzyme F390 synthetase3e-0963.2
NC_015638:1824794:1844428184442818457141287Lacinutrix sp. 5H-3-7-4 chromosome, complete genomePhenylacetate--CoA ligase4e-0963.2
NC_008148:1859888:1867573186757318688951323Rubrobacter xylanophilus DSM 9941, complete genomePhenylacetate--CoA ligase3e-0860.1
NC_013093:1036772:1062951106295110642551305Actinosynnema mirum DSM 43827, complete genomePhenylacetate--CoA ligase3e-0860.1
NC_012632:2564801:2583227258322725845341308Sulfolobus islandicus M.16.27 chromosome, complete genomephenylacetate--CoA ligase9e-0858.5
NC_012588:2483000:2499134249913425004411308Sulfolobus islandicus M.14.25 chromosome, complete genomephenylacetate--CoA ligase9e-0858.5
NC_012589:2605085:2621829262182926231361308Sulfolobus islandicus L.S.2.15, complete genomePhenylacetate--CoA ligase1e-0758.2
NC_012622:2571812:2590640259064025919471308Sulfolobus islandicus Y.G.57.14 chromosome, complete genomephenylacetate--CoA ligase1e-0758.2
NC_012726:2461102:2479528247952824808351308Sulfolobus islandicus M.16.4 chromosome, complete genomephenylacetate--CoA ligase1e-0758.2
NC_017275:2519637:2538063253806325393701308Sulfolobus islandicus HVE10/4 chromosome, complete genomephenylacetate-CoA ligase1e-0758.2
NC_017276:2391645:2410071241007124113781308Sulfolobus islandicus REY15A chromosome, complete genomephenylacetate--CoA ligase1e-0758.2
NC_012623:2680601:2697343269734326986501308Sulfolobus islandicus Y.N.15.51 chromosome, complete genomephenylacetate--CoA ligase3e-0757
NC_006513:1379735:1412255141225514136491395Azoarcus sp. EbN1, complete genomepossible benzoylacetate-CoA ligase7e-0755.5