Pre_GI: BLASTP Hits

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Query: NC_009092:2902171:2926619 Shewanella loihica PV-4, complete genome

Start: 2926619, End: 2927521, Length: 903

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008321:2922000:294257429425742943476903Shewanella sp. MR-4, complete genomehistone deacetylase superfamily5e-104377
NC_008322:2983951:300325730032573004159903Shewanella sp. MR-7, complete genomehistone deacetylase superfamily9e-104376
NC_008577:3125675:314309731430973143999903Shewanella sp. ANA-3 chromosome 1, complete sequencehistone deacetylase superfamily7e-102370
NC_007645:6647500:667606266760626676982921Hahella chejuensis KCTC 2396, complete genomeDeacetylases, including yeast histone deacetylase and acetoin utilization protein7e-67254
NC_007604:1442500:144250414425041443418915Synechococcus elongatus PCC 7942, complete genomehistone deacetylase/AcuC/AphA family protein-like8e-67254
NC_006576:161112:177381177381178295915Synechococcus elongatus PCC 6301, complete genomesimilar to histone deacetylase/AcuC/AphA family protein3e-66252
NC_014010:484000:485524485524486438915Candidatus Puniceispirillum marinum IMCC1322 chromosome, completehistone deacetylase superfamily9e-66250
NC_007513:1388641:141790814179081418825918Synechococcus sp. CC9902, complete genomeputative histone deacetylase/AcuC/AphA family protein9e-64243
NC_005070:837567:840554840554841525972Synechococcus sp. WH 8102, complete genomePutative histone deacetylase/AcuC/AphA family protein8e-63240
NC_018644:516157:529571529571530467897Alpha proteobacterium HIMB59 chromosome, complete genomehistone deacetylase family protein7e-59227
NC_020908:823589:826925826925827830906Octadecabacter arcticus 238, complete genomeputative deacetylase2e-58226
NC_020911:1549065:156300815630081563913906Octadecabacter antarcticus 307, complete genomeputative deacetylase7e-58224
NC_014008:3296708:331176733117673312675909Coraliomargarita akajimensis DSM 45221 chromosome, complete genomehistone deacetylase superfamily7e-39161
NC_007181:163640:1753931753931764331041Sulfolobus acidocaldarius DSM 639, complete genomehistone deacetylase1e-24114
NC_015557:765500:793141793141794070930Hydrogenobaculum sp. 3684 chromosome, complete genomehistone deacetylase superfamily1e-21103
NC_015587:765500:793196793196794125930Hydrogenobaculum sp. SHO chromosome, complete genomehistone deacetylase superfamily1e-21103
NC_020411:765500:793168793168794097930Hydrogenobaculum sp. HO, complete genomehistone deacetylase superfamily1e-21103
NC_011126:779500:806626806626807555930Hydrogenobaculum sp. Y04AAS1, complete genomehistone deacetylase superfamily1e-1997.4
NC_015185:485866:512685512685513590906Desulfurobacterium thermolithotrophum DSM 11699 chromosome,histone deacetylase superfamily5e-1995.1
NC_014221:3137952:3136753313675331379551203Truepera radiovictrix DSM 17093 chromosome, complete genomeHistone deacetylase2e-1893.6
NC_009483:2640403:2658863265886326600201158Geobacter uraniireducens Rf4 chromosome, complete genomehistone deacetylase superfamily protein7e-1684.7
NC_017059:1727095:174218717421871743116930Rhodospirillum photometricum DSM 122, complete genomeHistone deacetylase superfamily1e-1584
NC_011126:555483:5771185771185782571140Hydrogenobaculum sp. Y04AAS1, complete genomehistone deacetylase superfamily3e-1582.8
NC_000918:707801:7088327088327099591128Aquifex aeolicus VF5, complete genomeacetoin utilization protein9e-1581.3
NC_010337:2339056:2354840235484023560121173Heliobacterium modesticaldum Ice1, complete genomeacetoin utilization protein, subunit c1e-1480.9
NC_019673:3726519:3732221373222137338671647Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1480.1
NC_010511:1074557:111043111104311111411981Methylobacterium sp. 4-46 chromosome, complete genomehistone deacetylase superfamily protein2e-1480.1
NC_009484:775828:7807527807527818251074Acidiphilium cryptum JF-5 chromosome, complete genomehistone deacetylase superfamily protein3e-1479.3
NC_010475:2896000:291428129142812915198918Synechococcus sp. PCC 7002, complete genomeacetylpolyamine aminohydrolase3e-1479.3
NC_017353:1235095:1254394125439412555511158Staphylococcus lugdunensis N920143, complete genomehistone deacetylase family protein3e-1479.3
NC_020411:558153:5660145660145671531140Hydrogenobaculum sp. HO, complete genomeHistone deacetylase4e-1479
NC_015557:558127:5659885659885671271140Hydrogenobaculum sp. 3684 chromosome, complete genomeHistone deacetylase4e-1479
NC_015587:558180:5660415660415671801140Hydrogenobaculum sp. SHO chromosome, complete genomeHistone deacetylase4e-1479
NC_009455:273519:3179703179703189951026Dehalococcoides sp. BAV1 chromosome, complete genomehistone deacetylase superfamily protein1e-1377.8
NC_007298:2689731:271313327131332714098966Dechloromonas aromatica RCB, complete genomeHistone deacetylase superfamily9e-1477.8
NC_007796:817404:826338826338827306969Methanospirillum hungatei JF-1, complete genomehistone deacetylase superfamily1e-1377.4
NC_019964:2816990:2816990281699028180031014Halovivax ruber XH-70, complete genomedeacetylase, histone deacetylase/acetoin utilization protein1e-1377
NC_007520:1940120:1955929195592919570681140Thiomicrospira crunogena XCL-2, complete genomeHistone deacetylase superfamily1e-1377
NC_019962:3331849:3349060334906033500941035Natrinema pellirubrum DSM 15624, complete genomedeacetylase, histone deacetylase/acetoin utilization protein3e-1376.3
NC_018691:359695:3657843657843668931110Alcanivorax dieselolei B5 chromosome, complete genomeHistone deacetylase superfamily2e-1376.3
NC_009925:5479613:548571454857145486640927Acaryochloris marina MBIC11017, complete genomehistone deacetylase family protein4e-1375.5
NC_017515:1653306:1655765165576516568741110Neisseria meningitidis M04-240196 chromosome, complete genomehypothetical protein3e-1272.8
NC_015966:1040562:1040562104056210415931032Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomehistone deacetylase superfamily4e-1272.4
NC_006396:2025500:2048019204801920490261008Haloarcula marismortui ATCC 43049 chromosome I, complete sequenceacetoin utilization protein5e-1272
NC_009380:1663545:1663545166354516647261182Salinispora tropica CNB-440 chromosome, complete genomehistone deacetylase superfamily protein5e-1272
NC_013411:681907:6948196948196959881170Geobacillus sp. Y412MC61, complete genomeHistone deacetylase6e-1271.6
NC_014915:2900209:2906569290656929077381170Geobacillus sp. Y412MC52 chromosome, complete genomeHistone deacetylase6e-1271.6
NC_015388:2499187:250392925039292504879951Desulfobacca acetoxidans DSM 11109 chromosome, complete genomehistone deacetylase superfamily9e-1271.2
NC_006138:2683545:2696232269623226972571026Desulfotalea psychrophila LSv54, complete genomehypothetical protein9e-1271.2
CP002207:2452286:2473919247391924750881170Bacillus atrophaeus 1942, complete genomeprotein deacetylase3e-1169.3
NC_014639:2452286:2473919247391924750881170Bacillus atrophaeus 1942 chromosome, complete genomeprotein deacetylase3e-1169.3
UCMB5137:2418403:2439887243988724410561170Bacillus atrophaeus UCMB-5137protein deacetylase3e-1169.3
NC_009328:2808897:2830063283006328312321170Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeacetoin utilization protein AcuC7e-1168.2
NC_008463:1293079:1293079129307912942211143Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative deacetylase8e-1167.8
NC_020304:1222000:1223266122326612243301065Desulfocapsa sulfexigens DSM 10523, complete genomedeacetylase, histone deacetylase/acetoin utilization protein1e-1067.4
NC_008344:1899317:192141019214101922330921Nitrosomonas eutropha C91, complete genomehistone deacetylase superfamily2e-1067
NC_008340:362000:379529379529380452924Alkalilimnicola ehrlichei MLHE-1, complete genomehistone deacetylase superfamily2e-1066.6
NC_011768:3854455:3854455385445538557681314Desulfatibacillum alkenivorans AK-01, complete genomehistone deacetylase superfamily3e-1065.9
NC_013889:1439326:145245014524501453373924Thioalkalivibrio sp. K90mix chromosome, complete genomeHistone deacetylase4e-1065.5
NC_015518:1518047:1534527153452715355461020Acidianus hospitalis W1 chromosome, complete genomehistone deacetylase superfamily protein9e-1064.7
NC_015723:1486000:151886415188641519808945Cupriavidus necator N-1 chromosome 2, complete sequencehistone deacetylase superfamily protein8e-1064.7
NC_003911:253400:270724270724271650927Silicibacter pomeroyi DSS-3, complete genomehistone deacetylase family protein1e-0964.3
NC_012785:20454:295752957530540966Kosmotoga olearia TBF 19.5.1, complete genomeHistone deacetylase1e-0963.9
NC_010338:588000:6052396052396063781140Caulobacter sp. K31, complete genomehistone deacetylase superfamily2e-0963.2
NC_016051:1849905:1871525187152518725291005Thermococcus sp. AM4 chromosome, complete genomehistone deacetylase4e-0962.4
NC_007760:3948730:395238439523843953358975Anaeromyxobacter dehalogenans 2CP-C, complete genomeHistone deacetylase superfamily6e-0961.6
NC_006569:69939:9665796657976911035Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencehistone deacetylase/AcuC/AphA family protein1e-0860.8
NC_012808:3897751:391563939156393916493855Methylobacterium extorquens AM1, complete genomeHistone deacetylase family protein3e-0859.3
NC_012988:347500:3594083594083604331026Methylobacterium extorquens DM4, complete genomehistone deacetylase3e-0859.3
NC_018750:3481476:3487735348773534888891155Streptomyces venezuelae ATCC 10712, complete genomeNAD-independent protein deacetylase AcuC4e-0858.9
NC_013440:5543667:5557259555725955583381080Haliangium ochraceum DSM 14365, complete genomeHistone deacetylase6e-0858.5
NC_014657:914071:9348619348619361771317Caldicellulosiruptor owensensis OL chromosome, complete genomehistone deacetylase superfamily9e-0857.8
NC_013385:1007616:1025036102503610263881353Ammonifex degensii KC4, complete genomeHistone deacetylase9e-0857.8
NC_007510:2284000:2288854228885422899631110Burkholderia sp. 383 chromosome 1, complete sequenceHistone deacetylase superfamily1e-0757.8
NC_000909:467607:4703264703264713571032Methanocaldococcus jannaschii DSM 2661, complete genomeacetylpolyamine aminohydrolase (aphA)2e-0757
NC_020304:129321:1313201313201335782259Desulfocapsa sulfexigens DSM 10523, complete genomedeacetylase, histone deacetylase/acetoin utilization protein2e-0653.1
NC_002678:5714000:5727449572744957284891041Mesorhizobium loti MAFF303099, complete genomeacetylpolyamine aminohydrolase3e-0652.8
NC_014532:1191267:1212351121235112133911041Halomonas elongata DSM 2581, complete genomehistone deacetylase superfamily5e-0652
NC_013173:1231213:1251678125167812534261749Desulfomicrobium baculatum DSM 4028, complete genomehistone deacetylase superfamily9e-0651.2