Pre_GI: BLASTP Hits

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Query: NC_009092:2282437:2308401 Shewanella loihica PV-4, complete genome

Start: 2308401, End: 2309273, Length: 873

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018678:2382708:238335223833522384143792Alteromonas macleodii str. 'English Channel 673' chromosome,mannosyl-glycoprotein endo-beta-N-acetylglucosamidase2e-52206
NC_016445:984856:100503810050381005838801Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completeBax protein5e-50197
NC_012668:2115228:211522821152282116031804Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein5e-50197
NC_002505:1507860:152804015280401528843804Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completebax protein, putative5e-50197
NC_017192:159047:175027175027175785759Arcobacter sp. L, complete genomehypothetical protein4e-28125
NC_004337:3590323:371792837179283718752825Shigella flexneri 2a str. 301, complete genomeputative ATP-binding protein4e-28125
NC_011653:1671910:168641616864161687192777Thermosipho africanus TCF52B, complete genomeBax protein5e-28124
NC_015380:303215:3221613221613233991239Candidatus Pelagibacter sp. IMCC9063 chromosome, complete genomebax protein (hydrolyses peptidoglycan)8e-27120
NC_012039:53497:548135481355520708Campylobacter lari RM2100, complete genomemannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain protein6e-1994.7
NC_003454:370418:381821381821382432612Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeBAX protein9e-1064.3