Pre_GI: BLASTP Hits

Some Help

Query: NC_009092:1989977:2014441 Shewanella loihica PV-4, complete genome

Start: 2014441, End: 2015004, Length: 564

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014836:1180454:118296711829671183521555Desulfurispirillum indicum S5 chromosome, complete genomehydrogenase maturation protease8e-44176
NC_007575:1484305:149956814995681500113546Sulfurimonas denitrificans DSM 1251, complete genomepeptidase M52, hydrogenase expression/formation protein8e-43172
NC_014216:1061265:107646110764611077039579Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomehydrogenase maturation protease1e-28125
NC_011740:2986514:300260830026083003102495Escherichia fergusonii ATCC 35469, complete genomematuration element for hydrogenase 23e-1581.3
NC_018515:937994:953554953554954042489Desulfosporosinus meridiei DSM 13257 chromosome, complete genomehydrogenase maturation protease4e-1477.8
NC_007626:1746475:178312517831251783607483Magnetospirillum magneticum AMB-1, complete genomeNi,Fe-hydrogenase maturation factor7e-1477
NC_017192:1933106:194111419411141941704591Arcobacter sp. L, complete genomeNi/Fe hydrogenase expression/formation protein1e-1376.3
NC_010278:1467146:148978514897851490282498Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hydrogenase 2 maturation endopeptidase2e-1272
NC_003198:1463253:148371814837181484326609Salmonella enterica subsp. enterica serovar Typhi str. CT18,hydrogenase 1 maturation protease3e-1271.6
NC_015499:352934:364517364517364999483Thermodesulfobium narugense DSM 14796 chromosome, complete genomehydrogenase maturation protease3e-1271.2
NC_010067:1414000:143075814307581431366609Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1270.9
NC_009720:2424975:243776824377682438394627Xanthobacter autotrophicus Py2, complete genomehydrogenase expression/formation protein1e-1169.7
NC_015557:30622:461234612346623501Hydrogenobaculum sp. 3684 chromosome, complete genomehydrogenase maturation protease1e-1169.7
NC_020411:28995:461574615746657501Hydrogenobaculum sp. HO, complete genomeHydrogenase 2 maturation peptidase1e-1169.7
NC_015587:28997:461594615946659501Hydrogenobaculum sp. SHO chromosome, complete genomehydrogenase maturation protease1e-1169.7
NC_013851:2610847:262632826263282626915588Allochromatium vinosum DSM 180 chromosome, complete genomehydrogenase expression/formation protein2e-1168.9
NC_013173:2261396:226199722619972262464468Desulfomicrobium baculatum DSM 4028, complete genomehydrogenase maturation protease2e-1168.6
NC_010067:1116148:111614811161481116744597Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-1167.8
NC_013741:838243:841462841462841932471Archaeoglobus profundus DSM 5631, complete genomehydrogenase maturation protease2e-1065.5
NC_011060:1947795:194852219485221949106585Pelodictyon phaeoclathratiforme BU-1, complete genomehydrogenase maturation protease6e-0960.5
NC_021182:1761789:177200017720001772473474Clostridium pasteurianum BC1, complete genomehydrogenase maturation protease9e-0960.1
NC_021182:1983456:199334819933481993821474Clostridium pasteurianum BC1, complete genomehydrogenase maturation protease9e-0960.1
NC_008340:2272692:229703822970382297664627Alkalilimnicola ehrlichei MLHE-1, complete genomehydrogenase expression/formation protein2e-0858.9
NC_009921:4035225:403762640376264038201576Frankia sp. EAN1pec, complete genomehydrogenase maturation protease6e-0857.4
NC_011745:1055354:107899110789911079578588Escherichia coli ED1a chromosome, complete genomehydrogenase 1 maturation protease2e-0755.5
NC_017275:927814:939545939545940069525Sulfolobus islandicus HVE10/4 chromosome, complete genomehydrogenase maturation protease4e-0651.2
NC_011059:921690:939764939764940237474Prosthecochloris aestuarii DSM 271, complete genomehydrogenase maturation protease9e-0650.1