Pre_GI: BLASTP Hits

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Query: NC_009092:1441813:1445248 Shewanella loihica PV-4, complete genome

Start: 1445248, End: 1446180, Length: 933

Host Lineage: Shewanella loihica; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is an environmental isolate from the Naha Vents, Hawaii, in the Pacific Ocean. Psychrotolerant bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella loihica is a psychrotolerant deep sea bacterium. This organism is able to reduce iron, manganese and uranium and may be useful for bioremediation at low temperatures.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014541:2325780:232788323278832328815933Ferrimonas balearica DSM 9799 chromosome, complete genomeprotein of unknown function DUF8977e-80297
NC_015581:1791658:179723817972381798218981Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomehypothetical protein9e-60230
NC_012438:565419:584266584266585240975Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomedomain transmembrane protein3e-48192
NC_008319:2172928:218080921808092181798990Synechococcus sp. CC9311, complete genomePredicted permease1e-46187
NC_017025:1735835:173954917395491740511963Flavobacterium indicum GPTSA100-9, complete genometransmembrane protein. Putative permease1e-40167
NC_006576:2610565:2623057262305726241781122Synechococcus elongatus PCC 6301, complete genomesodium-dependent bicarbonate transporter1e-1790.9
NC_007604:1512709:1525833152583315269541122Synechococcus elongatus PCC 7942, complete genomesodium-dependent bicarbonate transporter1e-1790.9
NC_003272:2560329:2560329256032925614411113Nostoc sp. PCC 7120, complete genomehypothetical protein2e-1686.3
NC_019745:3778017:3784727378472737859921266Gloeocapsa sp. PCC 7428, complete genomeprotein of unknown function DUF8975e-1168.6