Pre_GI Gene

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Host: NC_007604 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_007604:1512709 Synechococcus elongatus PCC 7942, complete genome

Host Lineage: Synechococcus elongatus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: This strain is a freshwater organism and is extensively studied due to its circadian clock which controls the expression of upwards of 800 genes during a 24 hour period. These unicellular cyanobacteria are also known as blue green algae and along with Prochlorococcus are responsible for a large part of the carbon fixation that occurs in marine environments. Synechococcus have a broader distribution in the ocean and are less abundant in oligotrophic (low nutrient) regions. These organism utilize photosystem I and II to capture light energy. They are highly adapted to marine environments and some strains have evolved unique motility systems in order to propel themselves towards areas that contain nitrogenous compounds. An obligate photoautotroph, it has been studied extensively by an international research community with respect to acquisition of organic carbon, transport and regulation of nitrogen compounds, adaptation to nutrient stresses, and reponse to light intensity.

This island contains ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
151270915139651257thiol oxidoreductase-likeQuickGO ontologyBLASTP
151407115151411071iron-regulated protein A precursorQuickGO ontologyBLASTP
151536915170001632probable porinQuickGO ontologyBLASTP
151723715188321596probable porinQuickGO ontologyBLASTP
15189941519449456hypothetical proteinBLASTP
151966415206681005cysteine synthase cysteine synthase AQuickGO ontologyBLASTP
15206741521363690Heat shock protein DnaJ-likeQuickGO ontologyBLASTP
15214821522141660putative multicomponent NaH antiporter subunit BQuickGO ontologyBLASTP
15221381522719582putative multicomponent NaH antiporter subunit BQuickGO ontologyBLASTP
15227121523005294hypothetical proteinBLASTP
15230021523259258hypothetical proteinBLASTP
15232561523642387hypothetical proteinBLASTP
152363915250811443putative multicomponent NaH antiporter subunit DQuickGO ontologyBLASTP
15250781525413336putative multicomponent NaH antiporter subunit CQuickGO ontologyBLASTP
152583315269541122sodium-dependent bicarbonate transporterQuickGO ontologyBLASTP
15277171528031315hypothetical proteinBLASTP
152814215303372196hypothetical proteinBLASTP
15304151530852438cytochrome CytMQuickGO ontologyBLASTP
15309701531083114cytochrome b6-f complex subunit 5QuickGO ontologyBLASTP
15311941531748555hypothetical proteinBLASTP
15317451532398654imidazole glycerol phosphate synthase glutamine amidotransferase subunitQuickGO ontologyBLASTP
153260515341701566hypothetical proteinBLASTP
15344491534877429hypothetical proteinBLASTP
153487415363671494UDP-N-acetylmuramyl-tripeptide synthetaseQuickGO ontologyBLASTP
15364071536673267hypothetical proteinBLASTP
15366641536912249Protein of unknown function DUF37QuickGO ontologyBLASTP
15369861537594609ribosomal protein S4QuickGO ontologyBLASTP