Pre_GI: BLASTP Hits

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Query: NC_009012:3617293:3617293 Clostridium thermocellum ATCC 27405, complete genome

Start: 3617293, End: 3618585, Length: 1293

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015589:2209011:2223858222385822251891332Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRadical SAM domain-containing protein1e-42174
NC_008553:329458:3473143473143483931080Methanosaeta thermophila PT, complete genomeRadical SAM domain protein3e-36153
NC_018876:2380018:2396813239681323980031191Methanolobus psychrophilus R15 chromosome, complete genomeradical SAM family Fe-S protein6e-33142
NC_019977:828427:8457208457208469041185Methanomethylovorans hollandica DSM 15978, complete genomeputative Fe-S oxidoreductase2e-32140
NC_007955:1498777:1504829150482915060401212Methanococcoides burtonii DSM 6242, complete genomeFe-S protein, radical SAM family6e-31135
NC_003552:661579:6772296772296782781050Methanosarcina acetivorans C2A, complete genomeheme d1 biosynthesis protein NirJ7e-1685.5
NC_019977:828427:8429508429508441071158Methanomethylovorans hollandica DSM 15978, complete genomeputative heme d1 biosynthesis radical SAM protein NirJ22e-1583.6
NC_014960:1735786:1753105175310517545201416Anaerolinea thermophila UNI-1, complete genomehypothetical protein4e-1582.8
NC_015589:1630461:165416316541631655155993Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeRadical SAM domain-containing protein6e-1582.4
NC_008701:37219:4525245252464211170Pyrobaculum islandicum DSM 4184, complete genomeRadical SAM domain protein2e-1480.9
NC_018876:2380018:2394099239409923951541056Methanolobus psychrophilus R15 chromosome, complete genomeradical SAM family Fe-S protein2e-1480.5
NC_009778:2951207:2950074295007429512101137Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-1272.8
NC_015379:2482901:2498872249887225000411170Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,coenzyme PQQ synthesis protein E5e-1272.4
NC_015379:6226661:6262271626227162634401170Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,coenzyme PQQ synthesis protein E7e-1272
NC_009033:653462:6708496708496723691521Staphylothermus marinus F1, complete genomeRadical SAM domain protein1e-1171.2
NC_013282:923500:9408649408649420001137Cronobacter turicensis, complete genomeCoenzyme PQQ synthesis protein E1e-1171.2
NC_012622:940990:9590429590429601781137Sulfolobus islandicus Y.G.57.14 chromosome, complete genomeradical SAM protein5e-1169.3
NC_012623:1631985:1631985163198516331211137Sulfolobus islandicus Y.N.15.51 chromosome, complete genomeradical SAM protein5e-1169.3
NC_014632:1404000:142077414207741421721948Ilyobacter polytropus DSM 2926 chromosome, complete genomemolybdenum cofactor biosynthesis protein A9e-1168.6
NC_002754:1661000:1665410166541016665461137Sulfolobus solfataricus P2, complete genomeCoenzyme PQQ synthesis protein E (pqqE-4)3e-1067
NC_008825:2761499:2761499276149927627431245Methylibium petroleiphilum PM1, complete genomecoenzyme PQQ synthesis protein E3e-1066.6
NC_013741:1068170:1086027108602710874151389Archaeoglobus profundus DSM 5631, complete genomeRadical SAM domain protein1e-0964.7
NC_018870:2537350:2547893254789325489151023Thermacetogenium phaeum DSM 12270 chromosome, complete genomecoenzyme PQQ synthesis protein E2e-0964.3
NC_015416:1039144:104021210402121041177966Methanosaeta concilii GP-6 chromosome, complete genomeradical SAM domain-containing protein3e-0963.5
NC_007181:1238806:125753712575371258478942Sulfolobus acidocaldarius DSM 639, complete genomemolybdenum cofactor biosynthesis protein A4e-0963.2
NC_018691:2810949:2832067283206728331581092Alcanivorax dieselolei B5 chromosome, complete genomeCoenzyme PQQ synthesis protein E4e-0962.8
NC_010814:3332088:3341308334130833423721065Geobacter lovleyi SZ, complete genomeRadical SAM domain protein5e-0962.8
NC_002689:309940:3114263114263124361011Thermoplasma volcanium GSS1, complete genomePredicted heme d1 biosynthesis protein (NirJ-related)9e-0962
NC_012470:1946968:1963790196379019649081119Streptococcus equi subsp. zooepidemicus, complete genomeRadical SAM superfamily protein9e-0962
NC_017276:85380:1027421027421037761035Sulfolobus islandicus REY15A chromosome, complete genomeradical SAM protein1e-0861.6
NC_012632:87590:1020641020641030981035Sulfolobus islandicus M.16.27 chromosome, complete genomeradical SAM protein9e-0961.6
NC_021182:300415:3140133140133153921380Clostridium pasteurianum BC1, complete genomeputative Fe-S oxidoreductase2e-0860.5
NC_014314:404315:4219644219644231091146Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeradical SAM domain-containing protein3e-0860.1
NC_012588:87592:1008541008541018881035Sulfolobus islandicus M.14.25 chromosome, complete genomeradical SAM protein6e-0859.3
NC_012589:87592:1008541008541018881035Sulfolobus islandicus L.S.2.15, complete genomeRadical SAM domain protein6e-0858.9
NC_013769:87582:1008601008601018941035Sulfolobus islandicus L.D.8.5 chromosome, complete genomeradical SAM protein6e-0858.9
NC_020389:1777409:179374717937471794421675Methanosarcina mazei Tuc01, complete genomeRadical SAM domain heme biosynthesis protein6e-0858.9
NC_007298:1824335:1828630182863018297571128Dechloromonas aromatica RCB, complete genomeCoenzyme PQQ biosynthesis protein E4e-0756.6
NC_008209:1097607:1112322111232211134281107Roseobacter denitrificans OCh 114, complete genomecoenzyme PQQ biosynthesis protein E5e-0756.2
NC_015500:484984:4982864982864998001515Treponema brennaborense DSM 12168 chromosome, complete genomeRadical SAM domain protein7e-0755.5
NC_014721:434501:4395624395624409591398Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeradical sam domain protein8e-0755.5
NC_003106:1367404:138709913870991388040942Sulfolobus tokodaii str. 7, complete genomehypothetical molybdenum cofactor biosynthesis protein A1e-0654.7
NC_019942:1211535:123891412389141239840927Aciduliprofundum sp. MAR08-339, complete genomemolybdenum cofactor biosynthesis protein A2e-0653.9
NC_007947:577315:582821582821583810990Methylobacillus flagellatus KT, complete genomemolybdenum cofactor synthesis-like protein3e-0653.5
NC_002607:3322:7363973639747421104Halobacterium sp. NRC-1, complete genomeMoaA5e-0652.8
NC_010364:3322:7468474684757571074Halobacterium salinarum R1, complete genomemolybdenum cofactor biosynthesis protein moaA7e-0652.4
NC_008061:2582000:2603205260320526043651161Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceRadical SAM7e-0652