Pre_GI: BLASTP Hits

Some Help

Query: NC_009012:2953638:3013237 Clostridium thermocellum ATCC 27405, complete genome

Start: 3013237, End: 3014322, Length: 1086

Host Lineage: Clostridium thermocellum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain is a well studied producer of endoglucanase and several restriction endonucleases. Thermophilic cellulose degrading bacterium. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a thermophilic anaerobe that produces an extracellular enzyme system capable of degrading crystalline cellulose to soluble sugars that are further utilized as the carbon source for growth.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007907:2249607:2249607224960722509471341Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-148524
NC_011898:3159411:3179549317954931808201272Clostridium cellulolyticum H10, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism9e-140496
NC_014376:3796990:3796990379699037982611272Clostridium saccharolyticum WM1 chromosome, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism6e-129460
NC_011898:3159411:3193165319316531944451281Clostridium cellulolyticum H10, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism3e-85315
NC_014624:287500:3031363031363044311296Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-29130
NC_014614:608946:6106426106426119581317Clostridium sticklandii, complete genomemembrane protein of unknown function3e-24112
NC_016894:77853:8475184751860941344Acetobacterium woodii DSM 1030 chromosome, complete genometwo-component sensor kinase2e-20100
NC_015172:850802:8642508642508662351986Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism3e-2099.8
NC_014624:3316916:3325039332503933263461308Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein2e-1790.1
NC_014376:3796990:3810963381096338128971935Clostridium saccharolyticum WM1 chromosome, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism2e-1584
NC_014376:1842290:1856441185644118583931953Clostridium saccharolyticum WM1 chromosome, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism1e-1584
NC_016048:308342:3296023296023309031302Oscillibacter valericigenes Sjm18-20, complete genomeputative two-component histidine kinase3e-1583.2
NC_018704:2417902:2427754242775424290611308Amphibacillus xylanus NBRC 15112, complete genomehypothetical protein3e-1583.2
NC_015275:3407358:3428726342872634306601935Clostridium lentocellum DSM 5427 chromosome, complete genomeATP-binding region ATPase domain protein3e-1582.8
NC_014376:2921769:2937034293703429383201287Clostridium saccharolyticum WM1 chromosome, complete genomehypothetical protein2e-1480.5
NC_013740:15401:3791137911392601350Acidaminococcus fermentans DSM 20731, complete genomehypothetical protein2e-1480.5
NC_013174:501326:5013265013265026601335Jonesia denitrificans DSM 20603, complete genomeATP-binding region ATPase domain protein2e-1480.5
NC_014363:1973670:1983520198352019848421323Olsenella uli DSM 7084 chromosome, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism5e-1375.5
NC_009922:42696:447554475545642888Alkaliphilus oremlandii OhILAs, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism9e-1374.7
NC_016048:375676:4001804001804012411062Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-1273.2
NC_012778:841934:8828038828038840501248Eubacterium eligens ATCC 27750, complete genomehypothetical protein6e-1272
NC_012778:207415:2180192180192193891371Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-1171.2
NC_014829:4016000:403715440371544037987834Bacillus cellulosilyticus DSM 2522 chromosome, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism1e-1068.2
NC_010520:1146000:1167569116756911688491281Clostridium botulinum A3 str. Loch Maree, complete genomehypothetical protein1e-1067.8
NC_011830:3904034:392188739218873922729843Desulfitobacterium hafniense DCB-2, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism4e-1065.9
NC_008261:576923:5946465946465959411296Clostridium perfringens ATCC 13124, complete genomesensor histidine kinase2e-0963.9
NC_007907:2879568:289453428945342895382849Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0963.5
NC_015977:3424178:3477888347788834791741287Roseburia hominis A2-183 chromosome, complete genomehypothetical protein7e-0962
NC_012778:1946924:1968799196879919701031305Eubacterium eligens ATCC 27750, complete genomehypothetical protein1e-0861.2
NC_014638:56500:607216072161326606Bifidobacterium bifidum PRL2010 chromosome, complete genomehistidine kinase-related ATPase2e-0860.8
NC_015977:3424178:3474611347461134759031293Roseburia hominis A2-183 chromosome, complete genomehypothetical protein1e-0860.8
NC_015690:8614000:8625480862548086267691290Paenibacillus mucilaginosus KNP414 chromosome, complete genometwo-component sensor histidine kinase4e-0859.3
NC_019978:875941:8916688916688929751308Halobacteroides halobius DSM 5150, complete genomehistidine kinase6e-0858.9
NC_014616:54500:574545745457969516Bifidobacterium bifidum S17 chromosome, complete genometwo-component sensor kinase1e-0654.3
NC_007644:1603696:161339516133951614228834Moorella thermoacetica ATCC 39073, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism2e-0653.9
NC_011837:3272752:3292796329279632940551260Clostridium kluyveri NBRC 12016, complete genomehypothetical protein2e-0653.5
NC_009706:3341250:3361294336129433625531260Clostridium kluyveri DSM 555 chromosome, complete genometwo-component sensor histidine kinase2e-0653.5
NC_007644:1638083:165899816589981659825828Moorella thermoacetica ATCC 39073, complete genomesignal transduction histidine kinase regulating citrate/malate metabolism8e-0651.6