Pre_GI: BLASTP Hits

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Query: NC_008593:196257:200850 Clostridium novyi NT, complete genome

Start: 200850, End: 201848, Length: 999

Host Lineage: Clostridium novyi; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: This strain (NT) was created so that it lacks the lethal toxin. Injection of spores of this organism into mice harboring tumors resulted in an increased immune response and destruction of the tumor tissue in a method known as COBALT (combination bacteriolytic therapy) when the spores along with chemotherapeutic agents or radiation are co-administered. The anaerobic bacteria preferentially target hypoxic cancer tissue and stimulate immune responses to that tissue. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. Clostridium novyi is an anaerobic bacterium found in soil, aquatic sediments, and intestinal tract of both animals and humans. Some types produce lethal toxins.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:198315:205526205526206494969Clostridium botulinum BKT015925 chromosome, complete genomepeptidase family T46e-129460
NC_017243:554500:568384568384569373990Brachyspira intermedia PWS/A chromosome, complete genomenylC-like family protein1e-88326
NC_019908:1565500:158521015852101586178969Brachyspira pilosicoli P43/6/78 chromosome, complete genomeesterase2e-88325
NC_018607:2472250:249307024930702494038969Brachyspira pilosicoli B2904 chromosome, complete genomeesterase2e-88325
NC_014624:3561756:356175635617563562727972Eubacterium limosum KIST612 chromosome, complete genomepeptidase S58 DmpA1e-81303
NC_015519:1205049:121481712148171215776960Tepidanaerobacter sp. Re1 chromosome, complete genomepeptidase S58 DmpA6e-81301
NC_009089:4140764:415749041574904158458969Clostridium difficile 630, complete genomeputative peptidase2e-79296
NC_013316:4018451:403581240358124036780969Clostridium difficile R20291, complete genomeputative peptidase2e-79296
NC_010718:2337209:2359384235938423604691086Natranaerobius thermophilus JW/NM-WN-LF, complete genomepeptidase S58 DmpA4e-69261
NC_014910:1501952:1523115152311515241281014Alicycliphilus denitrificans BC chromosome, complete genomepeptidase s58 dmpa7e-62238
NC_017068:1143515:117829911782991179267969Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative peptidase2e-59229
NC_014831:149626:1515751515751527531179Thermaerobacter marianensis DSM 12885 chromosome, complete genomepeptidase S58 DmpA1e-48194
NC_011420:2803196:2817336281733628184331098Rhodospirillum centenum SW, complete genomepeptidase family T4, putative1e-41170
NC_013947:1537275:154220215422021543104903Stackebrandtia nassauensis DSM 44728 chromosome, complete genomepeptidase S58 DmpA2e-39163
NC_009719:336000:3360363360363370731038Parvibaculum lavamentivorans DS-1 chromosome, complete genomepeptidase S58 DmpA9e-38157
NC_012632:538967:553861553861554712852Sulfolobus islandicus M.16.27 chromosome, complete genomepeptidase S58 DmpA9e-31134
NC_012623:2004786:202150420215042022355852Sulfolobus islandicus Y.N.15.51 chromosome, complete genomepeptidase S58 DmpA4e-30132
NC_018750:3315309:3336846333684633379371092Streptomyces venezuelae ATCC 10712, complete genomepossible hydrolase7e-29128
NC_010545:1691999:1715317171531717165131197Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein1e-26120
NC_013093:2471574:251029925102992511234936Actinosynnema mirum DSM 43827, complete genomepeptidase S58 DmpA8e-1271.6