Pre_GI: BLASTP Hits

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Query: NC_008542:197500:220256 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 220256, End: 220585, Length: 330

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007651:72952:124305124305124691387Burkholderia thailandensis E264 chromosome I, complete sequencepossible transcriptional regulator, XRE family2e-44177
NC_011000:2732330:278200927820092782338330Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative DNA-binding protein3e-42170
NC_007964:2762000:277306427730642773324261Nitrobacter hamburgensis X14, complete genometranscriptional regulator, XRE family1e-0961.6
NC_012792:627500:637235637235637438204Variovorax paradoxus S110 chromosome 2, complete genometranscriptional regulator, XRE family2e-0961.2
NC_013890:103807:108816108816109031216Dehalococcoides sp. GT chromosome, complete genometranscriptional regulator, XRE family6e-0856.2
NC_009455:273519:308492308492308707216Dehalococcoides sp. BAV1 chromosome, complete genomeXRE family transcriptional regulator6e-0856.2
NC_014500:894136:905379905379905648270Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein5e-0856.2
NC_015259:1803266:181078218107821810967186Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTranscriptional regulator, XRE family7e-0855.8
NC_014500:894136:905690905690905920231Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein8e-0855.8
NC_014500:1862000:190350619035061903814309Dickeya dadantii 3937 chromosome, complete genomeMunI regulatory protein9e-0855.5
NC_004463:18497:345793457934860282Bradyrhizobium japonicum USDA 110, complete genomeprobable transcriptional regulator1e-0755.1
NC_017249:18493:345743457434855282Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-0755.1
NC_010424:697187:744858744858745595738Candidatus Desulforudis audaxviator MP104C, complete genomeputative prophage repressor1e-0755.1
NC_008358:2638245:269643226964322696641210Hyphomonas neptunium ATCC 15444, complete genomeDNA-binding protein4e-0753.5
NC_002936:1395432:140162414016241401842219Dehalococcoides ethenogenes 195, complete genomeDNA-binding protein7e-0752.8
NC_013204:2234860:225284522528452253081237Eggerthella lenta DSM 2243, complete genometranscriptional regulator, XRE family7e-0752.8
NC_014618:1103239:112464711246471124898252Enterobacter cloacae SCF1 chromosome, complete genomehelix-turn-helix domain-containing protein8e-0752.4
NC_013739:2057781:205840820584082058677270Conexibacter woesei DSM 14684, complete genometranscriptional regulator, XRE family9e-0752.4
NC_011979:773673:785967785967786287321Geobacter sp. FRC-32, complete genometranscriptional regulator, XRE family1e-0652
NC_014618:1103239:112495011249501125180231Enterobacter cloacae SCF1 chromosome, complete genomehelix-turn-helix domain-containing protein1e-0651.6
NC_015590:145353:152549152549152821273Sinorhizobium meliloti AK83 chromosome 1, complete sequencehelix-turn-helix domain-containing protein2e-0651.2
NC_003047:536151:546632546632546901270Sinorhizobium meliloti 1021, complete genomeHYPOTHETICAL TRANSCRIPTION REGULATOR PROTEIN3e-0650.4
NC_013739:2106662:211189521118952112176282Conexibacter woesei DSM 14684, complete genometranscriptional regulator, XRE family3e-0650.4
NC_010546:4923496:1108711087121721086Cyanothece sp. ATCC 51142 chromosome circular, complete sequencehypothetical protein6e-0649.7