Pre_GI: BLASTP Hits

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Query: NC_008542:197500:210475 Burkholderia cenocepacia HI2424 chromosome 1, complete sequence

Start: 210475, End: 211626, Length: 1152

Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013508:26348:362173621737008792Edwardsiella tarda EIB202, complete genomeputative Zn peptidase1e-42173
NC_008025:1998500:2007222200722220083521131Deinococcus geothermalis DSM 11300, complete genomeprotein of unknown function DUF9552e-38160
NC_008609:112340:1177051177051188231119Pelobacter propionicus DSM 2379, complete genomehelix-turn-helix domain protein2e-38159
NC_008699:3775561:3787513378751337886311119Nocardioides sp. JS614, complete genomeprotein of unknown function DUF9554e-36152
NC_014638:1043854:1054736105473610559531218Bifidobacterium bifidum PRL2010 chromosome, complete genomehypothetical protein6e-32138
NC_016048:2873669:2901862290186229030551194Oscillibacter valericigenes Sjm18-20, complete genomeputative Xre family DNA-binding protein6e-32138
NC_018531:3983925:3993578399357839947171140Arthrobacter sp. Rue61a chromosome, complete genomehypothetical protein2e-31137
NC_014623:3199248:3206348320634832075531206Stigmatella aurantiaca DW4/3-1 chromosome, complete genomephage-like DNA-binding protein1e-31137
NC_015580:3411802:3413004341300434141551152Novosphingobium sp. PP1Y, complete genomehypothetical protein8e-31134
NC_007645:6407370:6419499641949964206621164Hahella chejuensis KCTC 2396, complete genomepredicted Zn peptidase1e-30134
NC_013729:4978401:5000135500013550012501116Kribbella flavida DSM 17836, complete genomeprotein of unknown function DUF9552e-29130
NC_017986:5867782:5878959587895958800531095Pseudomonas putida ND6 chromosome, complete genometranscriptional regulator1e-28127
NC_014650:603500:6266696266696278351167Geobacillus sp. Y4.1MC1 chromosome, complete genomehypothetical protein4e-28125
NC_010322:1817598:1836753183675318378531101Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein4e-27122
NC_011992:1381843:1390026139002613912311206Acidovorax ebreus TPSY, complete genomeprotein of unknown function DUF9554e-26119
NC_007086:2477040:2488076248807624893141239Xanthomonas campestris pv. campestris str. 8004, complete genometranscriptional regulator, HTH_3 family4e-26119
NC_003888:3893187:3904869390486939060411173Streptomyces coelicolor A3(2), complete genomeDNA-binding protein2e-25117
NC_011134:311360:3245343245343257031170Streptococcus equi subsp. zooepidemicus str. MGCS10565, completetranscriptional regulator4e-25115
NC_017075:2733898:2746211274621127472901080Rubrivivax gelatinosus IL144, complete genometranscriptional regulator, Xre family2e-24114
NC_007493:207932:2201722201722212301059Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencePutative DNA-binding protein2e-24114
NC_013929:2696648:2703814270381427048901077Streptomyces scabiei 87.22 chromosome, complete genomeregulatory protein1e-24114
NC_002927:2636694:2646550264655026477611212Bordetella bronchiseptica RB50, complete genomeputative phage-related DNA-binding protein4e-24112
NC_010943:1938136:1946295194629519474311137Stenotrophomonas maltophilia K279a, complete genomeputative phage-related protein8e-23108
NC_013502:102430:6778677878211044Rhodothermus marinus DSM 4252 plasmid pRMAR01, complete sequencehelix-turn-helix domain protein1e-21104
NC_009454:713892:7279337279337290001068Pelotomaculum thermopropionicum SI, complete genomehypothetical protein6e-21102
NC_006350:3710641:3719241371924137203111071Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative transcriptional regulator6e-21102
NC_008255:1701195:1716904171690417180011098Cytophaga hutchinsonii ATCC 33406, complete genomeconserved hypothetical protein with helix-turn-helix motif2e-20100
NC_014220:1858747:1863628186362818647431116Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeprotein of unknown function DUF9551e-1997.8
NC_007930:130948:1309481309481320781131Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Transcriptional regulator1e-1997.8
NC_010508:451184:4625024625024635721071Burkholderia cenocepacia MC0-3 chromosome 1, complete sequencehelix-turn-helix domain protein1e-1997.8
NC_016799:167362:1754151754151764401026Corynebacterium diphtheriae 31A chromosome, complete genomeputative transcriptional regulator2e-1997.1
NC_008027:4953432:4957720495772049588021083Pseudomonas entomophila L48, complete genomehypothetical protein2e-1996.7
NC_016947:4186150:4201054420105442021781125Mycobacterium intracellulare MOTT-02 chromosome, complete genomehypothetical protein2e-1894
NC_006087:28490:3729637296384501155Leifsonia xyli subsp. xyli str. CTCB07, complete genomeDNA-binding helix-turn-helix protein9e-1891.7
NC_013235:2902617:2949853294985329509351083Nakamurella multipartita DSM 44233, complete genomeprotein of unknown function DUF9551e-1790.9
NC_014837:33014:4755647556486411086Pantoea sp. At-9b chromosome, complete genomehypothetical protein4e-1789.4
NC_015663:1356982:1364836136483613659241089Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein1e-1688.2
NC_011593:580318:5971795971795983841206Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,helix-turn-helix domain-containing protein4e-1479.3
NC_017219:580093:5969725969725981771206Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein4e-1479.3
NC_014910:465980:499095499095499874780Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein7e-1478.6
NC_010572:3878660:3891903389190338930391137Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA-binding protein2e-1377
NC_020829:1:3716337163382301068Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein9e-1374.7
NC_020156:3050423:3053090305309030541391050Nonlabens dokdonensis DSW-6, complete genomehelix-turn-helix domain protein3e-1273.2
NC_015434:2657781:2679427267942726805181092Verrucosispora maris AB-18-032 chromosome, complete genomehelix-turn-helix domain-containing protein9e-1168.2
NC_018721:943801:9463219463219473761056Psychroflexus torquis ATCC 700755 chromosome, complete genomehypothetical protein4e-1066.2
NC_014364:1116439:1141492114149211426221131Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeprotein of unknown function DUF9559e-0961.6
NC_015422:1:6147614772771131Alicycliphilus denitrificans K601 chromosome, complete genomehelix-turn-helix domain-containing protein4e-0859.7
NC_009445:6621996:6646416664641666475881173Bradyrhizobium sp. ORS 278 chromosome, complete genomehypothetical protein5e-0755.8
NC_017167:2298962:231648923164892317274786Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1hypothetical protein9e-0755.1
NC_008726:549102:5498745498745511181245Mycobacterium vanbaalenii PYR-1, complete genomeprotein of unknown function DUF9552e-0653.9