Pre_GI: BLASTP Hits

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Query: NC_008463:1293079:1317407 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1317407, End: 1320187, Length: 2781

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008782:2683989:2696611269661126993972787Acidovorax sp. JS42, complete genomeputative DNA methylase01408
NC_015947:1877887:1882995188299518857872793Burkholderia sp. JV3 chromosome, complete genomeputative DNA methylase01407
NC_009656:5475540:5494372549437254971522781Pseudomonas aeruginosa PA7 chromosome, complete genometype II restriction enzyme methylase subunit01315
NC_014618:1103239:1134884113488411376492766Enterobacter cloacae SCF1 chromosome, complete genomeDNA methylase01244
NC_011206:1233985:1253707125370712565052799Acidithiobacillus ferrooxidans ATCC 53993, complete genomeputative DNA methylase01235
NC_008786:1936626:1946427194642719492132787Verminephrobacter eiseniae EF01-2, complete genomeputative DNA methylase01208
NC_008343:1699132:1699132169913217019482817Granulibacter bethesdensis CGDNIH1, complete genomeDNA modification methyltransferase-related protein01171
NC_013730:2359939:2370629237062923733852757Spirosoma linguale DSM 74, complete genometype II restriction enzyme, methylase subunit01154
NC_007794:262402:2760732760732788022730Novosphingobium aromaticivorans DSM 12444, complete genometype II restriction enzyme, methylase subunit01072
NC_010688:2781624:2795588279558827979902403Xanthomonas campestris pv. campestris, complete genomeSite-specific DNA-methyltransferase (adenine-specific)0983
NC_011757:3486283:3500179350017935029682790Methylobacterium chloromethanicum CM4, complete genometype II restriction enzyme, methylase subunit0907
NC_013410:3017983:3022464302246430251122649Fibrobacter succinogenes subsp. succinogenes S85 chromosome,type II restriction enzyme (methylase subunit)0669
NC_012108:2305327:2318006231800623206422637Desulfobacterium autotrophicum HRM2, complete genomeputative type II restriction enzyme (methylase subunit)0640
NC_012704:376783:3861253861253889562832Corynebacterium kroppenstedtii DSM 44385, complete genomehypothetical protein1e-178627
NC_014219:830966:8394848394848421412658Bacillus selenitireducens MLS10 chromosome, complete genomeputative type II restriction enzyme (methylase subunit)1e-175617
NC_000964:732255:7396277396277422662640Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-169596
NC_012880:3529017:3539696353969635423112616Dickeya dadantii Ech703, complete genomehypothetical protein1e-158560
NC_011758:247666:2548172548172576302814Methylobacterium chloromethanicum CM4 plasmid pMCHL01, completemethylase7e-138492
NC_013203:202008:2020082020082047672760Atopobium parvulum DSM 20469, complete genometype II restriction enzyme methylase subunits- like protein2e-120433
NC_009339:252174:2550092550092578132805Mycobacterium gilvum PYR-GCK plasmid pMFLV01, complete sequencehypothetical protein6e-118426
NC_003116:1734000:1734140173414017365512412Neisseria meningitidis Z2491, complete genomehypothetical protein7e-117422
NC_009077:2308634:2345951234595123487402790Mycobacterium sp. JLS, complete genomehypothetical protein4e-112406
NC_014246:496976:5079835079835108322850Mobiluncus curtisii ATCC 43063 chromosome, complete genomemethylase7e-110399
NC_013442:6586:3705337053398782826Gordonia bronchialis DSM 43247 plasmid pGBRO01, complete sequencehypothetical protein1e-109398
NC_011881:1:1060810608134752868Arthrobacter chlorophenolicus A6 plasmid pACHL02, completehypothetical protein4e-109396
NC_012704:1870000:1907089190708919099532865Corynebacterium kroppenstedtii DSM 44385, complete genomehypothetical protein3e-107390
NC_003902:2469500:248713224871322487965834Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein7e-75282
NC_012590:284793:2948972948972962011305Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein6e-73276
NC_010545:11950:2111721117229401824Corynebacterium urealyticum DSM 7109, complete genomeputative methylase5e-66253
NC_012590:284793:2921782921782932781101Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein5e-66253
NC_010545:11950:3814838148400881941Corynebacterium urealyticum DSM 7109, complete genomeputative methylase2e-54214
NC_010610:2013659:202617820261782027152975Lactobacillus fermentum IFO 3956, complete genomehypothetical protein1e-48195
NC_003911:2042389:2047955204795520508522898Silicibacter pomeroyi DSS-3, complete genomehypothetical protein8e-25116
NC_017080:1981788:1992712199271219961883477Phycisphaera mikurensis NBRC 102666, complete genomerestriction endonuclease/modification methylase5e-23110
NC_010815:40357:4147441474442302757Geobacter lovleyi SZ plasmid pGLOV01, complete sequencehypothetical protein6e-23110
NC_010545:11950:206502065020997348Corynebacterium urealyticum DSM 7109, complete genomehypothetical protein2e-1688.6
NC_008358:1623278:1632909163290916349872079Hyphomonas neptunium ATCC 15444, complete genomehypothetical protein2e-1481.6
NC_007802:3252300:3271614327161432742232610Jannaschia sp. CCS1, complete genomehypothetical protein3e-1377.8
NC_013510:2937530:2948060294806029521004041Thermomonospora curvata DSM 43183, complete genomehypothetical protein1e-1275.9
NC_010545:11950:421014210142448348Corynebacterium urealyticum DSM 7109, complete genomeputative methylase1e-1275.9
NC_013235:508585:5085855085855126284044Nakamurella multipartita DSM 44233, complete genomehypothetical protein1e-0966.2
NC_008278:256427:2599032599032642224320Frankia alni ACN14a, complete genomeconserved hypothetical protein; putative N-6 Adenine-specific DNA methylase domain.1e-0966.2
NC_002689:676728:6813376813376843603024Thermoplasma volcanium GSS1, complete genomeType II restriction enzyme, methylase subunit3e-0965.1
NC_014210:3248526:3256610325661032607014092Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,hypothetical protein3e-0861.6
NC_019792:3446895:3458347345834734612862940Natronobacterium gregoryi SP2 chromosome, complete genometype I restriction-modification system methyltransferase subunit5e-0860.5
NC_012030:246000:2646182646182667022085Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completeN-6 DNA methylase2e-0758.9
NC_013926:1270173:1273330127333012763172988Aciduliprofundum boonei T469 chromosome, complete genomeprotein of unknown function DUF4503e-0655.1