Pre_GI: BLASTP Hits

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Query: NC_008463:1293079:1313291 Pseudomonas aeruginosa UCBPP-PA14, complete genome

Start: 1313291, End: 1314076, Length: 786

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain is a human clinical isolate from a human burn patient. It is infectious in mice, Caenorhabditis elegans, Drosophila melanogaster, and Arabidopsis thaliana. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016602:2854107:286975128697512870539789Vibrio furnissii NCTC 11218 chromosome 1, complete sequencemating pair formation protein1e-72272
NC_016745:2028424:204472320447232045472750Oceanimonas sp. GK1 chromosome, complete genomeconjugal transfer protein TrbJ1e-67256
NC_008344:2374761:238273423827342383513780Nitrosomonas eutropha C91, complete genomeputative mating pair formation protein7e-64243
NC_004741:2593012:260828226082822609061780Shigella flexneri 2a str. 2457T, complete genomeputative mating pair formation protein7e-64243
NC_008344:669498:681747681747682526780Nitrosomonas eutropha C91, complete genomeputative mating pair formation protein7e-64243
NC_013456:3011518:302554130255413026311771Vibrio sp. Ex25 chromosome 1, complete genomeconjugative transfer protein TrbJ1e-61236
NC_008800:1300500:131858813185881319367780Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,conjugal transfer protein TrbJ1e-51203
NC_009800:2651730:266052426605242661318795Escherichia coli HS, complete genomeP-type conjugative transfer protein TrbJ1e-50199
NC_013722:1816561:185838418583841859157774Xanthomonas albilineans, complete genomeputative conjugal transfer protein7e-45180
NC_006350:3865584:387917138791713879950780Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative plasmid conjugal transfer protein3e-44178
NC_011000:183928:194371194371195144774Burkholderia cenocepacia J2315 chromosome 1, complete sequenceconjugal transfer protein TrbJ9e-44177
NC_020063:3690308:372791137279113728705795Enterobacteriaceae bacterium strain FGI 57, complete genomeP-type conjugative transfer protein TrbJ5e-43174