Pre_GI: BLASTP Hits

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Query: NC_008345:4107847:4114512 Shewanella frigidimarina NCIMB 400, complete genome

Start: 4114512, End: 4114679, Length: 168

Host Lineage: Shewanella frigidimarina; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from the North Sea near Aberdeen, United Kingdom. Iron-reducing marine bacterium. This genus includes species that inhabit a wide range of environments and are capable of utilizing a wide variety of electron acceptors during anaerobic respiration including some insoluble metal oxides while using very few carbon sources such as lactate or acetate. This group of organisms have been studied extensively for their electron transport systems. Shewanella frigidimarina is an iron-reducing marine bacterium. This organism have been isolated from seawater, sea ice, and marine algae.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009092:261778:270161270161270757597Shewanella loihica PV-4, complete genomephage integrase family protein4e-1580.1
NC_014012:3812754:382801038280103828606597Shewanella violacea DSS12, complete genomesite-specific recombinase, phage integrase family6e-1579.3
NC_010625:1602191:162214016221401622406267Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein1e-0858.5
NC_008314:477722:505403505403505858456Ralstonia eutropha H16 chromosome 2, complete sequencetruncated site-specific recombinase2e-0857.4
NC_007336:66000:825458254583171627Ralstonia eutropha JMP134 megaplasmid, complete sequencePhage integrase2e-0754.7
NC_012792:962292:971437971437972060624Variovorax paradoxus S110 chromosome 2, complete genomeintegrase family protein2e-0754.3
NC_010170:4739925:475923847592384759852615Bordetella petrii, complete genomehypothetical protein3e-0753.9
NC_015942:355944:362190362190362819630Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein9e-0752.4
NC_008740:3520500:355204135520413552655615Marinobacter aquaeolei VT8, complete genomephage integrase family protein1e-0652
NC_013446:2164974:218941721894172190040624Comamonas testosteroni CNB-2, complete genomephage integrase1e-0652
NC_017075:1970168:197925419792541979877624Rubrivivax gelatinosus IL144, complete genomephage integrase family protein1e-0652
NC_017506:4380196:440114444011444401758615Marinobacter adhaerens HP15 chromosome, complete genomephage integrase family protein2e-0651.6
NC_009952:2752500:275627227562722756904633Dinoroseobacter shibae DFL 12, complete genomehypothetical protein1e-0651.6
NC_014910:2779573:278745227874522788075624Alicycliphilus denitrificans BC chromosome, complete genomeintegrase family protein2e-0651.2
NC_014539:743523:750816750816751442627Burkholderia sp. CCGE1003 chromosome 1, complete sequenceintegrase family protein2e-0651.2
NC_015572:2186394:220779522077952208418624Methylomonas methanica MC09 chromosome, complete genomeintegrase family protein2e-0650.8
NC_017047:2042346:206242220624222063024603Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein4e-0650.1
NC_020209:47504:858688586886488621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC8e-0649.3
NC_020829:940692:982480982480983100621Pseudomonas denitrificans ATCC 13867, complete genomesite-specific recombinase XerC8e-0649.3
NC_013956:1762171:179168017916801792282603Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein7e-0649.3
NC_016816:4129299:415125441512544151856603Pantoea ananatis LMG 5342, complete genomesite-specific recombinase, phage integrase family7e-0649.3
NC_020209:47504:604376043761057621Pseudomonas poae RE*1-1-14, complete genomesite-specific recombinase XerC9e-0648.9