Pre_GI: BLASTP Hits

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Query: NC_008278:175500:175624 Frankia alni ACN14a, complete genome

Start: 175624, End: 177327, Length: 1704

Host Lineage: Frankia alni; Frankia; Frankiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from a green alder (Alnus crispa) growing in Tadoussac, Canada. These bacteria were originally linked to fungi, because of the mycelium-like filaments many of them form. This bacterium is able to establish a nitrogen-fixing symbiosis with alder (Alnus spp.) and myrtle (Myrica spp.), two pioneer plant genera of temperate regions, found on forest clearings, mine wastes, sand dunes and glacial moraines where nitrogen is the limiting factor. Frankia alni causes root hair deformation: it penetrates the cortical cells and induces the formation of nodules which resemble those induced by Rhizobium in legumes. These nodules are then colonized by vegetative hyphae (mycelium filaments) which differentiate into diazo-vesicles




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015434:3581001:358911635891163589820705Verrucosispora maris AB-18-032 chromosome, complete genomeGntR family transcriptional regulator1e-1378.6
NC_013929:1611940:1635331163533116366171287Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-1377.4
NC_008148:583030:583030583030583788759Rubrobacter xylanophilus DSM 9941, complete genomeGntR-like protein1e-1275.1
NC_015656:1876627:188194718819471882705759Frankia symbiont of Datisca glomerata chromosome, complete genomeGntR domain-containing protein1e-1171.6
NC_013929:1670402:1680081168008116815261446Streptomyces scabiei 87.22 chromosome, complete genomeGntR family transcriptional regulator2e-1171.2
NC_016947:1311264:133507813350781335860783Mycobacterium intracellulare MOTT-02 chromosome, complete genomeregulatory protein GntR4e-1170.1
NC_016582:9664000:967760596776059678303699Streptomyces bingchenggensis BCW-1 chromosome, complete genomeGntR family transcriptional regulator6e-1169.7
NC_021171:4549673:455230045523004552956657Bacillus sp. 1NLA3E, complete genomeGntR family transcriptional regulator5e-1169.7
NC_008595:2546696:257775925777592578541783Mycobacterium avium 104, complete genomeregulatory protein GntR, HTH5e-1169.7
NC_015145:3236445:327180532718053272530726Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometranscriptional regulator1e-1068.9
NC_014532:349384:349384349384350133750Halomonas elongata DSM 2581, complete genometranscriptional regulator, GntR family1e-1068.6
NC_013526:105195:119507119507120259753Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeGntR domain protein2e-1068.2
NC_011831:1336779:134177413417741342454681Chloroflexus aggregans DSM 9485, complete genomeregulatory protein GntR HTH5e-1066.6
NC_008148:1859888:187784118778411878557717Rubrobacter xylanophilus DSM 9941, complete genomeGntR-like protein1e-0965.5
NC_019673:7797666:780755578075557808226672Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, GntR family9e-1065.5
NC_021171:2019755:202131920213192022035717Bacillus sp. 1NLA3E, complete genometranscriptional regulator9e-1065.5
NC_007974:2097334:213197321319732132776804Ralstonia metallidurans CH34 chromosome 2, complete sequenceregulatory protein GntR, HTH2e-0964.7
NC_015656:454500:467927467927468721795Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein GntR2e-0964.3
NC_014666:4043279:404875440487544049623870Frankia sp. EuI1c chromosome, complete genomeregulatory protein GntR HTH3e-0963.9
NC_013501:1337489:134428613442861345053768Rhodothermus marinus DSM 4252, complete genomeGntR domain protein3e-0963.9
NC_016593:762216:786841786841787500660Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completetranscriptional regulator, GntR3e-0963.9
NC_015137:868944:8772368772368786991464Burkholderia sp. CCGE1001 chromosome 2, complete sequencehypothetical protein4e-0963.5
NC_015733:3595882:361682836168283617592765Pseudomonas putida S16 chromosome, complete genomeDNA-binding transcriptional regulator GlcC6e-0963.2
NC_016935:3819500:382680038268003827531732Paenibacillus mucilaginosus 3016 chromosome, complete genometranscriptional regulator6e-0962.8
NC_020210:661236:668499668499669158660Geobacillus sp. GHH01, complete genomeHTH-type transcriptional regulator7e-0962.8
NC_007953:811500:823033823033823689657Burkholderia xenovorans LB400 chromosome 3, complete sequenceTranscriptional regulator, GntR family9e-0962.4
NC_015726:3452232:345223234522323453200969Cupriavidus necator N-1 chromosome 1, complete sequenceGntR family transcriptional regulator1e-0862
NC_015690:3269000:327636032763603277091732Paenibacillus mucilaginosus KNP414 chromosome, complete genometranscriptional regulator2e-0861.6
NC_016048:3667890:367938436793843680112729Oscillibacter valericigenes Sjm18-20, complete genomeputative GntR family transcriptional regulator2e-0861.2
NC_014550:2562053:256446125644612565135675Arthrobacter arilaitensis Re117, complete genomeputative GntR family transcriptional regulator2e-0861.2
NC_010337:2339056:234209423420942342804711Heliobacterium modesticaldum Ice1, complete genometranscriptional regulator, GntR family2e-0860.8
NC_015376:3631392:363629736362973637145849Burkholderia gladioli BSR3 chromosome chromosome 2, completeGntR domain protein2e-0860.8
NC_015733:3736104:378283237828323783611780Pseudomonas putida S16 chromosome, complete genomeDNA-binding transcriptional regulator GlcC3e-0860.8
NC_017195:517344:536111536111536803693Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completetranscriptional regulator, GntR family3e-0860.5
NC_007712:433500:437760437760438524765Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator1e-0758.9
NC_006510:2044347:206127920612792062007729Geobacillus kaustophilus HTA426, complete genometranscriptional regulator9e-0858.9
NC_014479:2505823:252667125266712527399729Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeGntR family transcriptional regulator9e-0858.9
NC_013173:2261396:226881722688172269518702Desulfomicrobium baculatum DSM 4028, complete genomeGntR domain protein1e-0758.5
NC_015687:2632557:265543326554332656128696Clostridium acetobutylicum DSM 1731 chromosome, complete genomeFadR family transcriptional regulator2e-0758.2
NC_016906:2845424:285973028597302860314585Gordonia polyisoprenivorans VH2 chromosome, complete genomeGntR family transcriptional regulator2e-0757.8
NC_016948:3104403:311207231120723112752681Mycobacterium intracellulare MOTT-64 chromosome, complete genomeregulatory protein GntR3e-0757.4
NC_008596:4196194:420135942013594202099741Mycobacterium smegmatis str. MC2 155, complete genomeGntR-family protein transcriptional regulator6e-0756.2
NC_007722:2993852:301451730145173015245729Erythrobacter litoralis HTCC2594, complete genomeregulatory protein GntR, HTH2e-0655.1
NC_008699:2260606:228173422817342282474741Nocardioides sp. JS614, complete genomeGntR domain protein1e-0655.1
NC_010498:1117938:113871911387191139375657Escherichia coli SMS-3-5, complete genomeGntR family transcriptional regulator2e-0654.7
NC_010515:1205258:122268812226881223482795Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceGntR domain protein3e-0653.9
NC_007963:2777066:277978327797832780505723Chromohalobacter salexigens DSM 3043, complete genomeGntR-like protein3e-0653.9
NC_011001:302500:311448311448312281834Burkholderia cenocepacia J2315 chromosome 2, complete sequenceepidemic strain marker regulator3e-0653.9
NC_013595:5221330:523280552328055233494690Streptosporangium roseum DSM 43021, complete genomeGntR family transcriptional regulator4e-0653.5
NC_007974:2097334:213104121310412131952912Ralstonia metallidurans CH34 chromosome 2, complete sequenceregulatory protein GntR, HTH4e-0653.5
NC_011740:2737467:274186427418642742535672Escherichia fergusonii ATCC 35469, complete genomeputative gntR family regulatory protein6e-0653.1
NC_007912:1231436:123868412386841239451768Saccharophagus degradans 2-40, complete genome1,4-alpha-glucan branching enzyme7e-0652.8
NC_010511:871905:873389873389874153765Methylobacterium sp. 4-46 chromosome, complete genomeGntR family transcriptional regulator8e-0652.8
NC_012880:1091486:111621711162171116951735Dickeya dadantii Ech703, complete genomeGntR domain protein9e-0652.4
NC_016513:1761830:177384217738421774597756Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeD-mannonate oxidoreductase9e-0652.4
NC_013416:1429881:143955414395541440309756Aggregatibacter actinomycetemcomitans D11S-1, complete genomeD-mannonate oxidoreductase9e-0652.4
NC_015172:1471501:147493214749321475636705Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeregulatory protein GntR HTH1e-0552.4