Pre_GI: BLASTP Hits

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Query: NC_008268:361424:368769 Rhodococcus sp. RHA1, complete genome

Start: 368769, End: 369269, Length: 501

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008269:577111:584906584906585412507Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencepossible helicase4e-62236
NC_015957:5182460:5208278520827852107552478Streptomyces violaceusniger Tu 4113 chromosome, complete genomehelicase-associated4e-1063.9
NC_016109:8761557:8780534878053487828972364Kitasatospora setae KM-6054, complete genomeputative helicase1e-0962.4
NC_016109:1:38238227452364Kitasatospora setae KM-6054, complete genomeputative helicase1e-0962.4
NC_016114:1:1086410864135092646Streptomyces flavogriseus ATCC 33331 chromosome, complete genometype III restriction protein res subunit9e-0856.2
NC_015953:1:85978597110382442Streptomyces sp. SirexAA-E chromosome, complete genomehelicase domain-containing protein5e-0753.5