Pre_GI: BLASTP Hits

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Query: NC_008268:1748635:1760712 Rhodococcus sp. RHA1, complete genome

Start: 1760712, End: 1762436, Length: 1725

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016906:181254:2222242222242244972274Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative type III restriction protein res subunit2e-120433
NC_015434:1173794:1192170119217011933421173Verrucosispora maris AB-18-032 chromosome, complete genomeDNA repair helicase4e-80299
NC_013441:382597:4027874027874053182532Gordonia bronchialis DSM 43247, complete genometype III restriction protein res subunit2e-51204
NC_009486:1737703:1773271177327117746651395Thermotoga petrophila RKU-1 chromosome, complete genometype III restriction enzyme, res subunit1e-40168
NC_018876:516220:5556015556015569411341Methanolobus psychrophilus R15 chromosome, complete genomeDNA repair helicase5e-29129
NC_020388:578500:6144146144146158231410Natronomonas moolapensis 8.8.11 complete genomeDNA repair helicase Rad255e-28126
NC_011901:1122357:1129571112957111307281158Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype III restriction enzyme, res subunit4e-27123
NC_013966:399215:4493114493114507111401Haloferax volcanii DS2 plasmid pHV4, complete sequenceDNA repair helicase Rad256e-27122
NC_007426:1840670:1850832185083218522411410Natronomonas pharaonis DSM 2160, complete genomehelicase homolog4e-26120
NC_008212:1386834:1404871140487114062801410Haloquadratum walsbyi DSM 16790, complete genomeDNA repair helicase RAD252e-26120
NC_013967:1590500:1607341160734116087531413Haloferax volcanii DS2 chromosome, complete genomeDNA repair helicase Rad252e-25117
NC_014958:3346500:3347830334783033492451416Deinococcus maricopensis DSM 21211 chromosome, complete genometype III restriction protein res subunit5e-25116
NC_012028:336864:3382223382223396221401Halorubrum lacusprofundi ATCC 49239 chromosome 2, complete genometype III restriction protein res subunit3e-24114
NC_008818:1244612:1285708128570812873301623Hyperthermus butylicus DSM 5456, complete genomeDNA or RNA helicases of superfamily II1e-23111
NC_000961:372000:4108894108894122381350Pyrococcus horikoshii OT3, complete genomehypothetical protein2e-23110
NC_015671:3153325:3164167316416731653421176Cellvibrio gilvus ATCC 13127 chromosome, complete genomehelicase domain-containing protein2e-22107
NC_015474:983468:9900959900959914441350Pyrococcus sp. NA2 chromosome, complete genomehypothetical protein2e-21104
NC_014374:1072218:1072218107221810738431626Acidilobus saccharovorans 345-15 chromosome, complete genomePutative DNA repair helicase6e-21102
NC_009718:518873:5369435369435390332091Fervidobacterium nodosum Rt17-B1, complete genometype III restriction protein res subunit1e-20102
NC_009483:2854500:2868165286816528702852121Geobacter uraniireducens Rf4 chromosome, complete genometype III restriction enzyme, res subunit2e-20101
NC_011884:1541256:1549390154939015508741485Cyanothece sp. PCC 7425, complete genometype III restriction protein res subunit7e-2099.4
NC_019940:2997439:3010583301058330127062124Thioflavicoccus mobilis 8321 chromosome, complete genomeDNA phosphorothioation system restriction enzyme3e-1997.1
NC_008212:1295061:1302340130234013043552016Haloquadratum walsbyi DSM 16790, complete genomeDNA repair helicase3e-1997.1
NC_014160:1124956:1140760114076011424121653Thermosphaera aggregans DSM 11486 chromosome, complete genomeDNA repair helicase RAD255e-1996.3
NC_013410:2037840:2052043205204320542742232Fibrobacter succinogenes subsp. succinogenes S85 chromosome,type III restriction protein res subunit9e-1995.5
NC_016613:1159980:1170207117020711723602154Vibrio sp. EJY3 chromosome 1, complete sequencetype III restriction enzyme, res subunit4e-1893.2
NC_009376:1291901:1290555129055512919101356Pyrobaculum arsenaticum DSM 13514 chromosome, complete genometype III restriction enzyme, res subunit1e-1791.7
NC_008576:777949:7823617823617837491389Magnetococcus sp. MC-1, complete genometype III restriction enzyme, res subunit3e-1790.5
NC_015676:1361468:1385597138559713886053009Methanosalsum zhilinae DSM 4017 chromosome, complete genometype III restriction protein res subunit3e-1687.4
NC_008209:761487:7858247858247879082085Roseobacter denitrificans OCh 114, complete genomehelicase conserved C-terminal domain, putative7e-1685.9
NC_003155:3652587:3666923366692336690672145Streptomyces avermitilis MA-4680, complete genomeDNA repair helicase1e-1481.6
NC_020388:1479568:1522178152217815246672490Natronomonas moolapensis 8.8.11 complete genomeprobable helicase5e-1376.6
NC_009073:529148:5679415679415698841944Pyrobaculum calidifontis JCM 11548, complete genometype III restriction enzyme, res subunit9e-1065.9
NC_013440:1580802:1595287159528715967441458Haliangium ochraceum DSM 14365, complete genometype III restriction protein res subunit2e-0758.2
NC_013169:1058463:1074909107490910766781770Kytococcus sedentarius DSM 20547, complete genomeDNA/RNA helicase, superfamily II2e-0654.7
NC_018681:867230:886063886063886890828Nocardia brasiliensis ATCC 700358 chromosome, complete genometype III restriction protein res subunit3e-0653.9
NC_020302:1241504:1258261125826112611792919Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein5e-0653.5
NC_005835:1773482:1802867180286718044201554Thermus thermophilus HB27, complete genomeheat resistant RNA dependent ATPase7e-0652.8
NC_014210:5309121:5314356531435653157441389Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,DEAD/DEAH box helicase domain protein7e-0652.8