Pre_GI: BLASTP Hits

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Query: NC_008261:1787345:1799682 Clostridium perfringens ATCC 13124, complete genome

Start: 1799682, End: 1800284, Length: 603

Host Lineage: Clostridium perfringens; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: The species type strain, originally isolated from a human gas gangrene patient. Causative agent of gas gangrene. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. Known opportunistic toxin-producing pathogens in animals and humans. Some species are capable of producing organic solvents (acetone, ethanol, etc,), molecular hydrogen and other useful compounds. This organism is a causative agent of a wide spectrum of necrotic enterotoxicoses. It also causes such animal diseases as lamb dysentery, ovine enterotoxemia (struck), pulpy kidney disease in lambs and other enterotoxemias in lambs and calves. It is commonly found in the environment (soil, sewage) and in the animal and human gastrointestinal tract as a member of the normal microflora. It is a fast growing (generation time 8-10 min) anaerobic flesh-eater. Active fermentative growth is accompanied by profuse generation of molecular hydrogen and carbon dioxide. It is also oxygen tolerant which makes it an easy object to work with in laboratories. C. perfringens have been developed and the species became a model organism in clostridial genetic studies. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. Known isolates belong to five distinct types (A, B, C, D, and E) that are distinguished based on the specific extracellular toxins they produce. All types produce the alpha toxin (phospholipase C). Type A strains that cause gas gangrene produce alpha toxin, theta (hemolysin), kappa (collagenase), mu (hyaluronidase), nu (DNAse) and neuraminidase which are all the enzymatic factors aiding the bacterium in invading and destruction of the host tissues. Type C strains produce alpha toxin, beta toxin and prefringolysin enteritis. In addition to alpha toxin, Type B strains produce beta toxin, types B and D produce the pore forming epsilon toxin and type E strains produce iota toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011898:3367457:338563633856363386235600Clostridium cellulolyticum H10, complete genomephage major tail protein, phi13 family1e-1893.2
NC_010674:950276:960411960411961010600Clostridium botulinum B str. Eklund 17B, complete genomemajor tail protein3e-1892
NC_014393:937000:967257967257967826570Clostridium cellulovorans 743B chromosome, complete genomephage major tail protein, phi13 family5e-1787.8
NC_009706:2673906:271166027116602712250591Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein2e-1582.8
NC_014393:4775452:479801947980194798618600Clostridium cellulovorans 743B chromosome, complete genomephage major tail protein, phi13 family2e-1478.6
NC_014218:1663486:168330316833031683890588Arcanobacterium haemolyticum DSM 20595 chromosome, complete genomephage major tail protein, phi13 family5e-1477.4
NC_016627:4323370:434256243425624343161600Clostridium clariflavum DSM 19732 chromosome, complete genomephage major tail protein, phi13 family8e-1477
NC_015520:2974048:298014729801472980746600Mahella australiensis 50-1 BON chromosome, complete genomephage major tail protein, phi13 family2e-1375.9
NC_016791:4038069:405615940561594056749591Clostridium sp. BNL1100 chromosome, complete genomephage major tail protein, phi13 family1e-1375.9
NC_018870:2316499:234275423427542343353600Thermacetogenium phaeum DSM 12270 chromosome, complete genomephage major tail protein, phi13 family4e-1374.7
NC_009012:1934107:195263119526311953227597Clostridium thermocellum ATCC 27405, complete genomephage major tail protein, phi13 family5e-1374.3
NC_014410:800500:820838820838821437600Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,phage major tail protein, phi13 family7e-1373.6
NC_010320:1268355:129769712976971298299603Thermoanaerobacter sp. X514 chromosome, complete genomephi13 family phage major tail protein8e-1373.6
NC_014538:1598106:161608216160821616684603Thermoanaerobacter sp. X513 chromosome, complete genomephage major tail protein, phi13 family8e-1373.6
NC_009633:4097536:411534741153474116228882Alkaliphilus metalliredigens QYMF chromosome, complete genomephi13 family phage major tail protein3e-1271.6
NC_014829:2915500:292259029225902923159570Bacillus cellulosilyticus DSM 2522 chromosome, complete genomephage major tail protein, phi13 family6e-1167.4
NC_020291:1122282:113273611327361133314579Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephage major tail protein, Phi13 family2e-1065.5
NC_014328:303063:373734373734374564831Clostridium ljungdahlii ATCC 49587 chromosome, complete genomephage protein1e-0962.8
NC_014915:2963500:298253629825362983105570Geobacillus sp. Y412MC52 chromosome, complete genomephage major tail protein, phi13 family4e-0961.2
NC_013411:597235:620830620830621399570Geobacillus sp. Y412MC61, complete genomephage major tail protein, phi13 family4e-0961.2
NC_015690:1186545:121859012185901219219630Paenibacillus mucilaginosus KNP414 chromosome, complete genomephage major tail protein, phi13 family4e-0857.8
NC_006322:1507411:152341115234111523992582Bacillus licheniformis ATCC 14580, complete genomehypothetical protein8e-0857
NC_006270:1511000:152255015225501523131582Bacillus licheniformis ATCC 14580, complete genomephage related protein8e-0857
NC_016935:1636278:166805216680521668666615Paenibacillus mucilaginosus 3016 chromosome, complete genomephage major tail protein, phi13 family2e-0755.8
NC_015519:2489728:251513125151312515703573Tepidanaerobacter sp. Re1 chromosome, complete genomephage major tail protein, phi13 family7e-0753.9
NC_011773:4141765:415595841559584156563606Bacillus cereus AH820 chromosome, complete genomephage major tail protein, Phi13 family1e-0652.8
NC_021184:4493440:450408745040874504653567Desulfotomaculum gibsoniae DSM 7213, complete genomephage major tail protein, phi13 family6e-0650.8
NC_017068:1216548:122138712213871221944558Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative phage major tail protein, phi13 family9e-0650.1
NC_016771:2039195:204207220420722042656585Bacillus cereus NC7401, complete genomeprophage LambdaBa02, major tail protein9e-0650.1
NC_011658:2080390:208326720832672083851585Bacillus cereus AH187 chromosome, complete genomeputative prophage LambdaBa02, major tail protein9e-0650.1