Pre_GI: BLASTP Hits

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Query: NC_008260:2961291:2969361 Alcanivorax borkumensis SK2, complete genome

Start: 2969361, End: 2970731, Length: 1371

Host Lineage: Alcanivorax borkumensis; Alcanivorax; Alcanivoracaceae; Oceanospirillales; Proteobacteria; Bacteria

General Information: This bacterium was isolated from a seawater sediment sample in the North Sea. The species is able to use Mihagol-S (C14,15-n-alkanes) as a principal carbon source. Using n-alkanes as a sole carbon source causes the strains to produce extracellular and membrane-bound surface-active glucose lipids. Phenotypic analysis showed a restricted nutritional profile, high halotolerance, the absence of fermentative metabolism, and a low G+C content. This, in combination with a 16S phylogenetic study, allowed the placing of this organism into a new genus.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009654:4624459:4631006463100646323341329Marinomonas sp. MWYL1, complete genomeMATE efflux family protein2e-54213
NC_015559:3511231:3514523351452335158451323Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeMATE efflux family protein2e-54213
NC_004347:718091:7190847190847204421359Shewanella oneidensis MR-1, complete genomeMATE efflux family protein2e-34147
NC_009052:4335754:4335754433575443371211368Shewanella baltica OS155, complete genomeMATE efflux family protein2e-33144
NC_008322:641197:6422776422776436351359Shewanella sp. MR-7, complete genomeMATE efflux family protein9e-33141
NC_014541:475350:5317815317815331271347Ferrimonas balearica DSM 9799 chromosome, complete genomeMATE efflux family protein6e-32139
NC_009092:521519:5275115275115288781368Shewanella loihica PV-4, complete genomeMATE efflux family protein6e-32139
NC_010506:5195000:5215531521553152168861356Shewanella woodyi ATCC 51908, complete genomeMATE efflux family protein5e-32139
NC_008700:3692333:3706716370671637080831368Shewanella amazonensis SB2B, complete genomeMATE efflux family protein3e-30133
NC_011753:206178:2316862316862331161431Vibrio splendidus LGP32 chromosome 1, complete genomeMultidrug efflux pump protein6e-30132
NC_008609:2840249:2853862285386228552651404Pelobacter propionicus DSM 2379, complete genomeMATE efflux family protein3e-1376.6
NC_019978:922978:9229789229789243481371Halobacteroides halobius DSM 5150, complete genomeputative efflux protein, MATE family9e-1272
NC_009956:88354:1066351066351080441410Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequencemulti anti extrusion protein MatE4e-1169.7
NC_019962:2129393:2151904215190421533881485Natrinema pellirubrum DSM 15624, complete genomeputative efflux protein, MATE family2e-1067.8
NC_016048:1438721:1466945146694514683001356Oscillibacter valericigenes Sjm18-20, complete genomeMatE efflux family protein7e-0962.4
NC_010718:2492895:2509927250992725113301404Natranaerobius thermophilus JW/NM-WN-LF, complete genomeMATE efflux family protein2e-0861.2
NC_007759:2146254:2161721216172121630821362Syntrophus aciditrophicus SB, complete genomeNa+ driven multidrug efflux pump1e-0758.5
NC_014500:3097362:3104536310453631059151380Dickeya dadantii 3937 chromosome, complete genomeNa+ driven multidrug efflux pump2e-0757.8
NC_013923:45876:6275562755642571503Natrialba magadii ATCC 43099 plasmid pNMAG01, complete sequenceMATE efflux family protein3e-0757
NC_003552:2502689:2544485254448525458911407Methanosarcina acetivorans C2A, complete genomeDNA damage-inducible protein1e-0655.1
NC_013201:145973:1470801470801484921413Halomicrobium mukohataei DSM 12286 plasmid pHmuk01, completeMATE efflux family protein5e-0652.8
NC_019962:1750497:1763099176309917645831485Natrinema pellirubrum DSM 15624, complete genomeputative efflux protein, MATE family6e-0652.4