Pre_GI: BLASTP Hits

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Query: NC_008253:296500:319076 Escherichia coli 536, complete genome

Start: 319076, End: 319627, Length: 552

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (536; O6:K15:H31) is a uropathogenic Escherichia coli (UPEC) that was isolated from a patient with acute pyelonephritis (inflammation of the kidney and pelvis). This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:1166568:119601811960181196569552Escherichia coli CFT073, complete genomePutative Regulatory protein3e-97353
NC_008253:4735418:474532147453214745875555Escherichia coli 536, complete genomePapX protein5e-95346
NC_004431:3409389:342877934287793429330552Escherichia coli CFT073, complete genomePapX protein6e-95346
NC_008253:3941938:395838139583813958932552Escherichia coli 536, complete genomeMarR-family transcriptional regulatory protein2e-93340
NC_007946:4779745:478828747882874788838552Escherichia coli UTI89, complete genomeputative regulator PapX protein4e-93340
NC_011750:3545466:354999735499973550548552Escherichia coli IAI39 chromosome, complete genomeputative HTH-type transcriptional regulator1e-92338
NC_004431:364000:371227371227371751525Escherichia coli CFT073, complete genomehypothetical protein1e-34145
NC_007946:289425:306702306702307226525Escherichia coli UTI89, complete genomehypothetical protein1e-34145
NC_008253:334467:363400363400363924525Escherichia coli 536, complete genometranscriptional regulator MarR family (PapX protein)1e-34145
NC_012779:2957000:298044429804442980962519Edwardsiella ictaluri 93-146, complete genomehypothetical protein3e-23108
NC_005085:786851:791066791066791566501Chromobacterium violaceum ATCC 12472, complete genometranscriptional repressor emr operon, MarR family2e-1891.7
NC_012559:1301988:132496813249681325474507Laribacter hongkongensis HLHK9, complete genomeEmrR1e-1789.4
NC_009725:692237:719938719938720450513Bacillus amyloliquefaciens FZB42, complete genomeYetL2e-0962.4
NC_008321:3189974:320949732094973210033537Shewanella sp. MR-4, complete genometranscriptional regulator, MarR family5e-0960.8
NC_014910:2585747:260439026043902604893504Alicycliphilus denitrificans BC chromosome, complete genomeregulatory protein marr1e-0859.3
NC_013446:2961647:297742629774262977920495Comamonas testosteroni CNB-2, complete genometranscriptional regulator, MarR family1e-0756.2
NC_018691:761560:771386771386771814429Alcanivorax dieselolei B5 chromosome, complete genomeMarR family transcriptional regulator2e-0755.8
NC_016628:763833:791320791320791802483Vibrio furnissii NCTC 11218 chromosome 2, complete sequencetranscriptional regulator, MarR family protein3e-0755.1
NC_015589:3085442:309538330953833095811429Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeregulatory protein MarR2e-0652
NC_015391:1323171:134073813407381341175438Carnobacterium sp. 17-4 chromosome, complete genomeHTH-type transcriptional regulator MhqR3e-0651.6
NC_012581:2885519:290674329067432907138396Bacillus anthracis str. CDC 684 chromosome, complete genomeMarR family transcriptional regulator5e-0650.4
NC_014150:1123570:112357011235701124010441Brachyspira murdochii DSM 12563 chromosome, complete genometranscriptional regulator, MarR family6e-0650.4