Pre_GI: BLASTP Hits

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Query: NC_008228:816000:833783 Pseudoalteromonas atlantica T6c, complete genome

Start: 833783, End: 835168, Length: 1386

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016818:2836851:2861697286169728631931497Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein7e-31135
NC_009778:567000:5992425992426006121371Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-28126
NC_010338:2443765:2458677245867724600501374Caulobacter sp. K31, complete genomehypothetical protein1e-27124
NC_015410:1202370:1212762121276212141171356Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein1e-26121
NC_003910:486776:4970194970194986171599Colwellia psychrerythraea 34H, complete genomehypothetical protein2e-1790.5
NC_004547:3866439:3877589387758938788301242Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein9e-1788.6
NC_013446:2761000:2787302278730227885521251Comamonas testosteroni CNB-2, complete genomehypothetical protein6e-1685.9
NC_003919:4618988:4642098464209846434351338Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein3e-1583.6
NC_011601:1269500:1279122127912212804951374Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeATP-binding protein7e-1582
NC_013956:3181421:3190323319032331915821260Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein2e-1377
NC_016642:3286654:3294710329471032963021593Pseudovibrio sp. FO-BEG1 chromosome, complete genomehypothetical protein2e-1274.3
NC_009429:401500:407777407777408463687Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completehypothetical protein8e-1065.5
NC_016612:2009927:2025670202567020272891620Klebsiella oxytoca KCTC 1686 chromosome, complete genomeSMC domain-containing protein1e-0965.1
NC_016631:3917253:3954335395433539561461812Granulicella mallensis MP5ACTX8 chromosome, complete genomehypothetical protein4e-0963.2
NC_010400:3271722:3276923327692332784311509Acinetobacter baumannii, complete genomehypothetical protein6e-0962.4
NC_016147:1961000:1974709197470919763191611Pseudoxanthomonas spadix BD-a59 chromosome, complete genomehypothetical protein7e-0962.4
NC_010554:1008444:1026081102608110277331653Proteus mirabilis HI4320, complete genomehypothetical protein7e-0962.4
NC_016940:2974396:2983906298390629859422037Saprospira grandis str. Lewin chromosome, complete genomehypothetical protein3e-0860.1
NC_009974:53865:5918259182607411560Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU02, completehypothetical protein3e-0860.1
NC_016816:1137904:1158706115870611603671662Pantoea ananatis LMG 5342, complete genomeSMC domain-containing protein3e-0860.1
NC_013716:3512950:3523598352359835252441647Citrobacter rodentium ICC168, complete genomehypothetical protein8e-0858.9
NC_011979:3112911:3122020312202031237441725Geobacter sp. FRC-32, complete genomehypothetical protein1e-0758.5
NC_007613:761234:7697877697877714361650Shigella boydii Sb227, complete genomeputative phage-related protein1e-0758.2
CU928145:299080:309345309345310340996Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-0757.8
NC_011748:299080:309345309345310340996Escherichia coli 55989, complete genomehypothetical protein2e-0757.8
NC_013720:5769910:5785117578511757868831767Pirellula staleyi DSM 6068, complete genomeABC transporter3e-0757
NC_012793:3243727:3266069326606932674241356Geobacillus sp. WCH70, complete genomehypothetical protein4e-0756.6
NC_020541:2551539:2563713256371325651971485Rhodanobacter sp. 2APBS1, complete genomehypothetical protein8e-0755.5
NC_011745:2209288:2216529221652922183131785Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-0655.1
NC_006576:1435422:1441091144109114424641374Synechococcus elongatus PCC 6301, complete genomeputative excinuclease ATPase subunit1e-0655.1
NC_007604:168176:1784191784191797921374Synechococcus elongatus PCC 7942, complete genomeATPase1e-0655.1
NC_014934:244587:2460912460912478301740Cellulophaga algicola DSM 14237 chromosome, complete genomehypothetical protein1e-0654.7
NC_008752:558828:566539566539567294756Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein3e-0653.9
NC_015947:2231493:2242435224243522438891455Burkholderia sp. JV3 chromosome, complete genomeAAA ATPase4e-0653.1
NC_009663:2363841:2368198236819823700991902Sulfurovum sp. NBC37-1, complete genomehypothetical protein4e-0653.1
NC_010694:1932126:194626819462681946918651Erwinia tasmaniensis, complete genome7e-0652.4